Gene Sros_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1143 
Symbol 
ID8664418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1168157 
End bp1168600 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content73% 
IMG OID 
Productprotein of unknown function UPF0079 
Protein accessionYP_003336885 
Protein GI271962689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.216548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.597291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAATCG TGGCAACCGC CGAAGAGATG CGGGAGCTGG GCGTGGAGCT GGCGGGGCTG 
CTCCGGCCGG GAGACCTGGC GGTGCTGTCC GGGCCGCTCG GCGCGGGCAA GACGACCCTG
GTCCAGGGGA TCGCCGACGG GCTCAAGGTG CGCGGGCCGA TCACCTCCCC GACCTTCGTC
ATCGCCCGGG TGCACCCCTC GCTGTCGGGC GGCCCCGCGC TGGTGCACGC GGACGCCTAC
CGGCTGGGCG GCGACCTGGA GGTCGACGAC CTCGACCTGG ACGCCTCGCT GGAGGAGTCG
GTGACGGTCG TGGAGTGGGG CGAGGGTCTG GTCGAGGGGC TCGCCGACGA CCGGCTGGAG
ATCTCCATCG AGCGGGGCGA GTCCGGCGAG GAGCGGACGG TGCGGCTCCG CGGGATCGGT
GCGCGATGGG AGGGCATCGT CTGA
 
Protein sequence
MRIVATAEEM RELGVELAGL LRPGDLAVLS GPLGAGKTTL VQGIADGLKV RGPITSPTFV 
IARVHPSLSG GPALVHADAY RLGGDLEVDD LDLDASLEES VTVVEWGEGL VEGLADDRLE
ISIERGESGE ERTVRLRGIG ARWEGIV