Gene Sros_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1022 
Symbol 
ID8664296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1037077 
End bp1037577 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003336765 
Protein GI271962569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.581439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGACG AACCGGGCTT CGACGACTTC GTGGCCGAGC AGGCAGATGC GCTGCTCCGC 
TACGGATACG TCCTGACCGG AAACCCTCAC GACGCCGCCG ACCTGGTCCA GGAGGCTCTG
GTACGGCTGC GCGGCGCCTG GCCGCGCGTG AAACGCAAAG ACAGCCCGCA CAGCTACGCC
CGGACCACGA TGGCGCGGCT GCACATCAGC ATCTGGCGGC GGCACAGGCG TGAACACCTC
ACCGGAGAGC CGCCGGAGCG GGCTCACCAC GAAGTCTTCC CTCCCGACGA GGATCACGGT
CTCTGGGAGG AGCTGGCCGC GCTGCCCCGC AGACAGCGTG CCGTACTGGT GCTGCGCTAC
TACGAGCAGC TCGCCGACGC CGAGATCGCC GAAGTGCTCG GCATCTCTCC CGGCACCGTG
CGCAGCCAGG CCTCCCGGGG CCTGGACAAG CTGCGTTCCT CCCTCTCCCC CTCACCGGCG
ACCCACGGGA GCATGCGATG A
 
Protein sequence
MDDEPGFDDF VAEQADALLR YGYVLTGNPH DAADLVQEAL VRLRGAWPRV KRKDSPHSYA 
RTTMARLHIS IWRRHRREHL TGEPPERAHH EVFPPDEDHG LWEELAALPR RQRAVLVLRY
YEQLADAEIA EVLGISPGTV RSQASRGLDK LRSSLSPSPA THGSMR