Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0960 |
Symbol | |
ID | 8664233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 979597 |
End bp | 980790 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | Signal transduction histidine kinase-like protein |
Protein accession | YP_003336707 |
Protein GI | 271962511 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.874918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTGAGC TGATGGCGAG CCTGGCCGCG CTGGCCGGTT TCGTCGTGGG AGCGCTGGCC GTGATGGTCG TCCGCCAGAA CGTGGGACAG CGACGGATGA TGACGCCGGT GGACGACGTC GAGCCCGGCG CCCTGCCCCA CGGGGTCGCC TCGGTGCTGG CCGTACTGCC GTCCTCGGCG GTCGTGCTCG ACAAGGAGGA CCGGGTGCTG CGGGCCAGTT CGGCCGCGCG GGCGTTCGGT CTGGTCCGGG GGGACCACCT GATGGCGGCC GAGTTGCTCG CGCTGGCCAG GCAGGTGCGC AGGGACGGTG AGATCCGTGA GAGCGAGATC GAGGTGGCCG GGCACAAGTT CGGCCAGGAG TCGACCAACT TCGCGGTCAG GGTCGCCCCG CTGGGATCGC ACGGCCAGGT GCTGGTGCTC GCCGAGGACC AGACCGAGCA CCGGCGCGTG GAGGCGGTGC GCCGTGACTT CGTCGCCAAC GTGAGCCACG AGCTCAAGAC GCCGGTGGGC GCGCTGTCGC TGCTGGCGGA GACCATCCAG GACGCCGCCG ACGATCCCGA GGCGGTCACC CGCTTCGCCG GGCGCATGCA ACACGAGGCC GCCCGCCTCA CCTACCTGGT CCAGGACCTC ATCACCCTCT CCAGGATCCA GGGAGCCGAG CCCATCCCCA CCCCCGGCCC CGTCCCGATC GACGAGGCCG TGCACGAGGC CATCGACCGC TGCAACACCA CGGCGGCGGC CAAGGACATC ACCCTCGTCG CCGGCGGCGC CGAGGGCCTG CAGGTCTGGG GTGACGACGA GCTCCTCGTC ACCGCGCTGC GCAACCTCAT CGACAACGCG GTCGCCTACA GCCCCGAGCA CACCCGGGTC GTGGTCAGCG CGCGCGCGGC GGGCGCCCAC ACCGAGTCCG TCGAGATCAG CGTGAGCGAC CAGGGGATCG GCATCCCCGA GAGCGCGCAG GAGCGGATCT TCGAGCGCTT CTTCCGCGTC GACGCCGCCC GCTCGCGCGC GACCGGTGGC ACGGGCCTCG GCCTGGCCAT CGTCAAACAC GTCGCCGCCG CCCACAACGG CGCGGTGACG GTGTGGAGCA AGGAAGGCTC AGGCTCCACC TTCACCCTCC GCCTGCCCGC CTTCGGCGGC ATGGCGGTGG CTGTACCCGG TAGCACCACC ATCCCCCAGG AGGCCGCGCA GTGA
|
Protein sequence | MSELMASLAA LAGFVVGALA VMVVRQNVGQ RRMMTPVDDV EPGALPHGVA SVLAVLPSSA VVLDKEDRVL RASSAARAFG LVRGDHLMAA ELLALARQVR RDGEIRESEI EVAGHKFGQE STNFAVRVAP LGSHGQVLVL AEDQTEHRRV EAVRRDFVAN VSHELKTPVG ALSLLAETIQ DAADDPEAVT RFAGRMQHEA ARLTYLVQDL ITLSRIQGAE PIPTPGPVPI DEAVHEAIDR CNTTAAAKDI TLVAGGAEGL QVWGDDELLV TALRNLIDNA VAYSPEHTRV VVSARAAGAH TESVEISVSD QGIGIPESAQ ERIFERFFRV DAARSRATGG TGLGLAIVKH VAAAHNGAVT VWSKEGSGST FTLRLPAFGG MAVAVPGSTT IPQEAAQ
|
| |