Gene Sros_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0898 
Symbol 
ID8664171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp915751 
End bp916302 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003336646 
Protein GI271962450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC CGATCCGGCC CGCCGTACGT CGTGAGGATG TGAGTCAAGC CGGAACCGCC 
GACGAGCAGC TCGTCAGAGC GCTCTTCGAC GAACACGGCG GGCCACTCTA CGGCTACGTA
CTGCGGCTGA CGGGTGACCC GGGGAGAGCG GAGGACGTCG TGCAGGAGAC GCTGTTGCGG
GCCTGGCGGC ATCCCGACGC TCTCAGCGGG CGCCCCATCC GCGCGTGGCT GTTCACGGTG
GCCCGCAACC TCGTCGTCGA CCAGCATCGG GCGCGCAAGT CGCGCCCCCC GGAGACGGGC
GCCGAGGCGC TCGCCGTGCT GCCCGCCGAC GACGAGCTGG AGCGGGCCGT GGAGTCCTGG
GCGGTCGCCG AGGCGCTGGC CACGTTGCGG CCCGAGCACC GCGAGGTGCT CGCCGAGGTC
TACTACCAGG GGAAGTCGGT CAAAGAGGCC GCTGAGGCGC TCGGCATCCC TGCGGGAACG
GTGAAGTCGC GCACGTATTA CGCGCTTCGG GCGCTCAAGC TGGCGCTGGA GGAGCGGGGG
CTCGCGCCAT GA
 
Protein sequence
MSEPIRPAVR REDVSQAGTA DEQLVRALFD EHGGPLYGYV LRLTGDPGRA EDVVQETLLR 
AWRHPDALSG RPIRAWLFTV ARNLVVDQHR ARKSRPPETG AEALAVLPAD DELERAVESW
AVAEALATLR PEHREVLAEV YYQGKSVKEA AEALGIPAGT VKSRTYYALR ALKLALEERG
LAP