Gene Sros_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0856 
Symbol 
ID8664128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp878888 
End bp880588 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-type multidrug transport system ATPase and permease components-like protein 
Protein accessionYP_003336613 
Protein GI271962417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTC CTGACAGACA GAGGTCTCGC ACGGGGGCCG GCATACTCCG GACGGCTCTG 
CGGCGCAACG CGGGCGCCAT GACCTGGGGC ACCGTCCTCA TGGGCATGTA CCAGGCCGGC
GAGACCGCCT TCCCCATCGC GCTCGGCCTG ATCGTCGAAC ACACGTTGCG GGACCGGAGC
CTCGGCTCGC TCGCCCTGTC GATCGCCGCG CTGGCCGTGA TCATCACGAC CGTGTCACTG
TCGTGGCGGT TCGGGATGCG CATCCTGCAG AAGGCCAACA CGACCGAGGC GCACCGCTGG
CGTGTGCGGG TCGCGGCCTA CGGGCTCCAA CCGGTGGCCA GGGACGTCGA CCTCAAGTCC
GGCGAGGTCC TGACCATCGC CACCGAGGAC GCCGACCAGA CCGCCGACAT CATCGAGGTG
GTGCCGCTGC TGATCAGCTC ACTGGTCGCG GTGCTGATCA CAGCGGTCGC GCTGGGCATG
GCCAGCGTCC GGCTCGGCCT CCTGGTGATC GTGGGCACCA TCGCGATCCT GTCGATCCTG
AGCGTGATGT CCAAACGGAT CGGCACCGGC ACCCGCGAGC AGCAGGCCCG GGTGGCGCGG
GCGGGCGCGA AGGTCGCCGA CCTGATCATC GGCCTGCGCC CGTTGCACGG CTTCGGCGGC
AACCACGCGG CGTTCCTGTC CTACCGGAAG GTCAGCACGG AGGCGAAACG CCAGGCGATC
ACCGTCGCCA AGGTGAACGG CGCGTACGCC GGCACCGCGC TGGCACTCAA CGCGCTCCTC
GCCACCGCTG TGACCCTGAC GGCGGGCTGG CTGGCGTTCG ACGGCCAGAT CAGCATCGGG
GAGCTCGTCA TGGCCGTGGG GCTGGCGCAG TTCATCATGG AACCGCTCAG GCTGTTCTCG
GAGATGCCGA AGTACGTGAT GATCGCGCGT GCGTCGGCCG AGCGGATGGC GCTGGTACTG
GCCGCGCCTC CGGTGATGAC CCCGGGGCCG GAGCGCCTGT CCGCGGGCGG AGACCTTGAG
GTCGACAGCA TCCGATACGG GTCCCTGCGC GAGCTGAAGT TCCACGTGTC CGCCGGTGAG
TTCGTGGCGA TCGCCGCCTA CCAGCCGCGC GCGGCGGCCG ACCTCGCGTC GATCCTGACC
GTGAACGTCC CGCCCGACAC GTATGAGGGT GTGGTGCGGG TCGGCGGGCG GGAGATGAAG
GACCTGTCGA TCGAGGCGGT CCGCGAGCAC ATGCTGGTGA ACCCGTACGA CGGGGAGATC
TTCGCGGGCA CCCTCCGCAC GAACATCGAC CCGGCGGGCG CCGGCCGTAT GATCCCCGAG
GCCGTCGAGG CGTCCATGCT GACCGACGTC GTCGCCCTCC ACCGCGAAGG ACTCGACCAC
GGCGTCCGGG ACCGCGGCGC GAACCTTTCC GGCGGGCAGC GCCAACGGCT GTCCTTGGCC
CGAGCCCTCG CCGCCGACGC CGACATCCTG GTCCTGCGTG ACCCGACGAC AGCCGTCGAC
GCGGTCACCG AACAGCTCAT CGCGCGCAAC ATCGCGGAGC TACGCCGGAA CCGCACCACC
ATCGTGATCA CCAGCAGCCC GGCCCTCCTG GACGCCGCCG ACCGTGTCCT CGTCCTGGAC
GACGGCGTCA TCACCGCGGA CGACACCCAT CGGAACCTCC TCACCACCGA CGAGAACTAC
CGCCTGGCCG TGGCCCGGTG A
 
Protein sequence
MTTPDRQRSR TGAGILRTAL RRNAGAMTWG TVLMGMYQAG ETAFPIALGL IVEHTLRDRS 
LGSLALSIAA LAVIITTVSL SWRFGMRILQ KANTTEAHRW RVRVAAYGLQ PVARDVDLKS
GEVLTIATED ADQTADIIEV VPLLISSLVA VLITAVALGM ASVRLGLLVI VGTIAILSIL
SVMSKRIGTG TREQQARVAR AGAKVADLII GLRPLHGFGG NHAAFLSYRK VSTEAKRQAI
TVAKVNGAYA GTALALNALL ATAVTLTAGW LAFDGQISIG ELVMAVGLAQ FIMEPLRLFS
EMPKYVMIAR ASAERMALVL AAPPVMTPGP ERLSAGGDLE VDSIRYGSLR ELKFHVSAGE
FVAIAAYQPR AAADLASILT VNVPPDTYEG VVRVGGREMK DLSIEAVREH MLVNPYDGEI
FAGTLRTNID PAGAGRMIPE AVEASMLTDV VALHREGLDH GVRDRGANLS GGQRQRLSLA
RALAADADIL VLRDPTTAVD AVTEQLIARN IAELRRNRTT IVITSSPALL DAADRVLVLD
DGVITADDTH RNLLTTDENY RLAVAR