Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0856 |
Symbol | |
ID | 8664128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 878888 |
End bp | 880588 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC-type multidrug transport system ATPase and permease components-like protein |
Protein accession | YP_003336613 |
Protein GI | 271962417 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACTC CTGACAGACA GAGGTCTCGC ACGGGGGCCG GCATACTCCG GACGGCTCTG CGGCGCAACG CGGGCGCCAT GACCTGGGGC ACCGTCCTCA TGGGCATGTA CCAGGCCGGC GAGACCGCCT TCCCCATCGC GCTCGGCCTG ATCGTCGAAC ACACGTTGCG GGACCGGAGC CTCGGCTCGC TCGCCCTGTC GATCGCCGCG CTGGCCGTGA TCATCACGAC CGTGTCACTG TCGTGGCGGT TCGGGATGCG CATCCTGCAG AAGGCCAACA CGACCGAGGC GCACCGCTGG CGTGTGCGGG TCGCGGCCTA CGGGCTCCAA CCGGTGGCCA GGGACGTCGA CCTCAAGTCC GGCGAGGTCC TGACCATCGC CACCGAGGAC GCCGACCAGA CCGCCGACAT CATCGAGGTG GTGCCGCTGC TGATCAGCTC ACTGGTCGCG GTGCTGATCA CAGCGGTCGC GCTGGGCATG GCCAGCGTCC GGCTCGGCCT CCTGGTGATC GTGGGCACCA TCGCGATCCT GTCGATCCTG AGCGTGATGT CCAAACGGAT CGGCACCGGC ACCCGCGAGC AGCAGGCCCG GGTGGCGCGG GCGGGCGCGA AGGTCGCCGA CCTGATCATC GGCCTGCGCC CGTTGCACGG CTTCGGCGGC AACCACGCGG CGTTCCTGTC CTACCGGAAG GTCAGCACGG AGGCGAAACG CCAGGCGATC ACCGTCGCCA AGGTGAACGG CGCGTACGCC GGCACCGCGC TGGCACTCAA CGCGCTCCTC GCCACCGCTG TGACCCTGAC GGCGGGCTGG CTGGCGTTCG ACGGCCAGAT CAGCATCGGG GAGCTCGTCA TGGCCGTGGG GCTGGCGCAG TTCATCATGG AACCGCTCAG GCTGTTCTCG GAGATGCCGA AGTACGTGAT GATCGCGCGT GCGTCGGCCG AGCGGATGGC GCTGGTACTG GCCGCGCCTC CGGTGATGAC CCCGGGGCCG GAGCGCCTGT CCGCGGGCGG AGACCTTGAG GTCGACAGCA TCCGATACGG GTCCCTGCGC GAGCTGAAGT TCCACGTGTC CGCCGGTGAG TTCGTGGCGA TCGCCGCCTA CCAGCCGCGC GCGGCGGCCG ACCTCGCGTC GATCCTGACC GTGAACGTCC CGCCCGACAC GTATGAGGGT GTGGTGCGGG TCGGCGGGCG GGAGATGAAG GACCTGTCGA TCGAGGCGGT CCGCGAGCAC ATGCTGGTGA ACCCGTACGA CGGGGAGATC TTCGCGGGCA CCCTCCGCAC GAACATCGAC CCGGCGGGCG CCGGCCGTAT GATCCCCGAG GCCGTCGAGG CGTCCATGCT GACCGACGTC GTCGCCCTCC ACCGCGAAGG ACTCGACCAC GGCGTCCGGG ACCGCGGCGC GAACCTTTCC GGCGGGCAGC GCCAACGGCT GTCCTTGGCC CGAGCCCTCG CCGCCGACGC CGACATCCTG GTCCTGCGTG ACCCGACGAC AGCCGTCGAC GCGGTCACCG AACAGCTCAT CGCGCGCAAC ATCGCGGAGC TACGCCGGAA CCGCACCACC ATCGTGATCA CCAGCAGCCC GGCCCTCCTG GACGCCGCCG ACCGTGTCCT CGTCCTGGAC GACGGCGTCA TCACCGCGGA CGACACCCAT CGGAACCTCC TCACCACCGA CGAGAACTAC CGCCTGGCCG TGGCCCGGTG A
|
Protein sequence | MTTPDRQRSR TGAGILRTAL RRNAGAMTWG TVLMGMYQAG ETAFPIALGL IVEHTLRDRS LGSLALSIAA LAVIITTVSL SWRFGMRILQ KANTTEAHRW RVRVAAYGLQ PVARDVDLKS GEVLTIATED ADQTADIIEV VPLLISSLVA VLITAVALGM ASVRLGLLVI VGTIAILSIL SVMSKRIGTG TREQQARVAR AGAKVADLII GLRPLHGFGG NHAAFLSYRK VSTEAKRQAI TVAKVNGAYA GTALALNALL ATAVTLTAGW LAFDGQISIG ELVMAVGLAQ FIMEPLRLFS EMPKYVMIAR ASAERMALVL AAPPVMTPGP ERLSAGGDLE VDSIRYGSLR ELKFHVSAGE FVAIAAYQPR AAADLASILT VNVPPDTYEG VVRVGGREMK DLSIEAVREH MLVNPYDGEI FAGTLRTNID PAGAGRMIPE AVEASMLTDV VALHREGLDH GVRDRGANLS GGQRQRLSLA RALAADADIL VLRDPTTAVD AVTEQLIARN IAELRRNRTT IVITSSPALL DAADRVLVLD DGVITADDTH RNLLTTDENY RLAVAR
|
| |