Gene Sros_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0641 
Symbol 
ID8663910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp649717 
End bp651243 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content72% 
IMG OID 
Productpolysaccharide biosynthesis protein, putative 
Protein accessionYP_003336407 
Protein GI271962211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA GACAGGGCGC GGAGCCGGCA AGGGCCGACG CGGAGCCCGC GGCGCCGGGC 
GCGGCCACCT CCCAGGTCGG GGAGATCGGC CGCCAGGCCG GCCGCGGGCT GCGCTGGAGC
CTGCTGGGCA ACCTGGTGAT GAAGGTCGGC TCGTTCGGCA TGAGCCTGGT CCTCGCCCGC
CTGCTGGTAC CGGAGGACTT CGGCGTCTTC GCCATCGCGC TGGCGGCGAG TCAGATGGTC
ATCCACATCA ACGACGCCGG CATCATCGCG GCGACCGTGC AGTGGCGGGG CAGGCTTGAG
GAGATGGCGC CCACGGCGAC GGTCGTGGCC ATCGTGTCCA GCGGCCTCCT GTACGGGATC
TTCTGGATGA TCGCGCCGTA CTTCGCGCAG CTGTCCGGCA GCGAGGAGGC CACCTGGGTG
ATCCGGGTGC TCGCGGCCAC CAACGTCGTC TACGGCCTGA CCGCCGTGCG CAGCGCGGCG
CTGCTGCGCA GGTTCGAGCA GGACAAGCTC ACCAAGGCCA ACCTGGTGGG CTTCCTGGTC
AACGCCACGG TCTCCATCTC GCTCGCCGCC GGCGGCGCCG GGGCCTTCAG CTTCGCCTGG
GGCCAGCTCG CGGGCGCCTC GGTCACCGGG GTGCTGGTGG TCGCCTTCGC GCGGCTGCGG
ATCCGGTTCG GCCTCGACCG CGCGGTCGCC AGGCGGCTGC TGGTCTTCGG GCTCCCGCTG
TGCGTGAGCC TCGGCATCGA GGGCGTGCTG CTCAACGCCG ACTCCGTCAT CGTCGGCAAC
GCCCTCGGGC CCACCCTGCT CGGCCTCTAC CTGCTCGCGT TCAACATCTC CAGCTGGGTG
CCCGGCCTGA TCGGCACGGC CGTGCGCTAC GTCGCCCTGC CCAGCTTCTC GCGGCTGGCG
GAGGAGGATC CGAAGTCTCT GTCGCTGGGC GTGCAGCGGG CGGTCCCGCT GCTGCTGTCC
ATCGTGCTGC CGATCGCGGT GGTGATGGGC ACGCTCGCCC CCGCGCTGGT GGTCTTCCTG
TACGGCGAGC GCTGGGCGCC CTCCGCCGAG GTGCTGCGTT TCCTGGCGAT CGTGATGACC
GTGCGGATGC TGACCGCCCT GGCGTTCGAC GTCCTGGCCT CTCTCGGCGC CACCAAGGCC
ACCGTCTGGC TCAACCTGGG CTGGGCGGTG GTGCTGGTGC CCGCGCTGAT GACCGGTGCC
CGCGTGGACG GCATCCGGGG CGCGGCGATC GGGCACGCGG TGGTCGCCGT CCTGGTCGCG
CTGCCGCTGG CGACGCTCGC CCTGCACAGG GCCGGAGTGG TCCTCGCCCC GATCGCCCCC
GCCCTGGTGC GCCCGCTGCT CGGCGGCGTG CTCGCGGCGG CCGTCATGAC GTGGCTGGCC
CAGGTCGTCC ACGGCGTCCC GCTGGTCCAA CTGTGCGTGG CGGGCGGTAC GGGACTGCTC
GCCTTCATCC TCGTCGTCGT GCCGCAGGCC GTGCTCAGGC AGCTGGGCGG CAGGGTGACC
GAGCTGATCC CCGCACGCTC CCGCTGA
 
Protein sequence
MEDRQGAEPA RADAEPAAPG AATSQVGEIG RQAGRGLRWS LLGNLVMKVG SFGMSLVLAR 
LLVPEDFGVF AIALAASQMV IHINDAGIIA ATVQWRGRLE EMAPTATVVA IVSSGLLYGI
FWMIAPYFAQ LSGSEEATWV IRVLAATNVV YGLTAVRSAA LLRRFEQDKL TKANLVGFLV
NATVSISLAA GGAGAFSFAW GQLAGASVTG VLVVAFARLR IRFGLDRAVA RRLLVFGLPL
CVSLGIEGVL LNADSVIVGN ALGPTLLGLY LLAFNISSWV PGLIGTAVRY VALPSFSRLA
EEDPKSLSLG VQRAVPLLLS IVLPIAVVMG TLAPALVVFL YGERWAPSAE VLRFLAIVMT
VRMLTALAFD VLASLGATKA TVWLNLGWAV VLVPALMTGA RVDGIRGAAI GHAVVAVLVA
LPLATLALHR AGVVLAPIAP ALVRPLLGGV LAAAVMTWLA QVVHGVPLVQ LCVAGGTGLL
AFILVVVPQA VLRQLGGRVT ELIPARSR