Gene Sros_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0596 
Symbol 
ID8663865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp604570 
End bp606099 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content67% 
IMG OID 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003336363 
Protein GI271962167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.815561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGC TCTCGATCCT GATGGCCGTG CCCGTGCTGG GCGCGGTCGG GGTCTCCCTC 
ACCAAGAGTG ACAAGCTCGC CAAGCAACTG GCCCTCGCGG TCTCGCTGGT CGTGCTGGCG
CTGACCGGTG TCATGGCGGC CCAGTTCAAC CCGTCCTCGG CGACGCGCTT CCAGTTCGCC
GAGGTCTACG ACTGGATTCC CCGCTTCGGC GTGCACTACG GCGTCGGCGT GGACGGCATC
GCCCTGGTGC TGATCGCGCT GTCGGCGGTG CTCGTGCCGA TCGTGATCCT GGCCTCCTGG
CACGACGCCG ACGGCACCGG GGCCGCGGCC CCGCCCAAGC GTTCTGTGAA GACCTACTTC
GCGCTGCTGC TGGTGCTGGA AGCGATGATG ATCGGCGTCT TCGCGGCGAC CGACGTCTTC
CTCTTCTACG TCTTCTTCGA AGCCATGCTG ATCCCGATGT ACTTCATGAT CGGGTCGTAC
GGCGGCGCCC AGCGGTCCTA CGCGGCCGTG AAGTTCCTGC TCTACTCGCT GTTCGGCGGG
CTGCTCATGC TGGTCGCGGT GATCGCGCTC TACGTGATCG CCGACAAGGG CACGTTCATG
TTCCCCGAGC TGGTGGGGGT CATCCAGGAC CCGAACACGC AGAAGTGGCT GTTCCTCGGC
TTCTTCATCG CCTTCGCGGT CAAGGCGCCG CTGTGGCCGT TCCACACCTG GCTGCCCGAC
GCGGCCGCCC AGGCCCCGGC CGGCGCCGCC GTGCTGCTGG TCGGCGTGCT GGACAAGGTC
GGCACCTACG GCATGCTCCG CTTCTGCCTG GAGCTGTTCC CGGACGCGGC GAAGTTCTTC
ACGCCGCTGG TGATCGTGCT GTCGGTCGTG GGCATCGTCT ACGGCGCGAT CGTGGCGATC
GGCCAGACCG ACATCAAGCG CCTGATCGCC TACACCTCGA TCTCGCACTT CGGCTTCATC
GCGCTGGGCG TCTTCGCGAT GACCGCGCAC GGTGGCGCGG GCGCCACCCT CTACATGGTC
AACCACGGCT TCTCGACCGG CGCGCTGTTC CTGATCGCCG GATTCCTGAT CTACCGCCGG
GGTTCCAGCC AGATCGCCGA CTACGGAGGC GTGCAGAAGG TCGCCCCGCT GCTCGCGGGC
ACCTTCCTGA TCGCCGGCCT GTCCGGCCTC TCCCTGCCGG GCCTGTCCTC GTTCGTCAGC
GAGTTCATGG TCCTGATGGG CACCTACGAG CGCTACGCCG TCCCGGCGAT CATCGCCACG
AGCGGTGTGA TCCTGGCGGC CATCTACATC CTGTGGATGT ACCAGCGCAC GATGACCGGT
CCCACGGCCG AGTCGGTCAA GGGCTTCACC GACCTGAACA TCCGGGAGAG ATGGGTGGTG
GCCCCGCTGA TCGCGGTGAT CATCGCTCTC GGTTTCTTCC CCAAGCCGGT GCTCGACGTG
ATCAACCCCG CGGTGGACCA GACGCTGTCC AACGTTCATG TGGACCAGTT CACCCCAGCC
GTCGCTGACA AGAAGGGGGC CGGGCAGTGA
 
Protein sequence
MPWLSILMAV PVLGAVGVSL TKSDKLAKQL ALAVSLVVLA LTGVMAAQFN PSSATRFQFA 
EVYDWIPRFG VHYGVGVDGI ALVLIALSAV LVPIVILASW HDADGTGAAA PPKRSVKTYF
ALLLVLEAMM IGVFAATDVF LFYVFFEAML IPMYFMIGSY GGAQRSYAAV KFLLYSLFGG
LLMLVAVIAL YVIADKGTFM FPELVGVIQD PNTQKWLFLG FFIAFAVKAP LWPFHTWLPD
AAAQAPAGAA VLLVGVLDKV GTYGMLRFCL ELFPDAAKFF TPLVIVLSVV GIVYGAIVAI
GQTDIKRLIA YTSISHFGFI ALGVFAMTAH GGAGATLYMV NHGFSTGALF LIAGFLIYRR
GSSQIADYGG VQKVAPLLAG TFLIAGLSGL SLPGLSSFVS EFMVLMGTYE RYAVPAIIAT
SGVILAAIYI LWMYQRTMTG PTAESVKGFT DLNIRERWVV APLIAVIIAL GFFPKPVLDV
INPAVDQTLS NVHVDQFTPA VADKKGAGQ