| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0583 |
|---|
| Symbol | |
|---|
| ID | 8663852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 590798 |
|---|
| End bp | 592075 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | geranylgeranyl reductase |
|---|
| Protein accession | YP_003336350 |
|---|
| Protein GI | 271962154 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTGC CAGCCGCCAT GCAGCGGAAT GTCGCTGAGG CTGACGCCGA CGTAATCGTC
GTCGGCGCCG GGCCCGCCGG TTCGACAACC GCTTTCCATC TCGCACAGGC CGGGCTCGAC
GTCCTGTTGC TCGAGAAGAC CACATTCCCC CGCGAGAAGG TCTGCGGCGA CGGGCTGACG
CCCCGAGCCG TCAAGCAGCT CATCGCCATG GGGATCGACA TCGACGCTCC CGGCTGGGTC
AGGAACAAGG GCCTGCGCGT GGTCGGCGGC GGGCTCCGCT TCGAGCTCGA CTGGCCCGAG
CTGTCCAGCT ACCCGGACTT CGGGCTGGTC CGCACCCGGC AGGACTTCGA CGAGATCCTC
GCGGCCAACG CGGTGCGCGG CGGCGTCCGC CTGCTGCAGG GGGTCAACGT CACCGCCCCG
ATCCTCGACG ACCGCAGCGG CCACATCGTG GGCGTGGTCG CGAAGAAGGA CGGAGAAGAG
GTCTCCTACC GCTCCCGCCT GGTGGTCGCC GCCGACGGCA ACTCCACCCG GATCTCCCTG
GCGATGGGGC TGCACAAGCG CGAGGACCGC CCGATGGGCG TCGCCGTACG GACCTATTTC
GAGAGTCCGC GTCACGACGA CGACTACCTG GAGACCTGGC TGGAGCTGTG GGACGGCGAC
ACCCTGCTGC CCGGCTACGG CTGGATCTTC GGCGTCGGCG ACGGCACGTC CAACGTGGGC
CTCGGGCTGC TGAACACCTC CGAGTCCTTC AAGGGCATGG ACTACCGCGA CCTGCTCAGG
CGCTGGGTCA AGAACATGCC CCCGGAGTGG GGCTACGTCG AGGAGAACAT GACCACCCCC
ATCAGGGGGG CGGCGCTGCC GATGGCCTTC AACCGCCAGC CGCACTACAC GCGTGGCCTG
GTGCTGGTCG GCGACGCGGG CGGGATGATC AACCCGTTCA ACGGGGAGGG CATCGCCTAC
GCGATGGAGA CCGGCCAGAT CGCGGCCGAG ACCATCGTCC AGGCGCTGGC CAGGACGACC
CCCGCCCAGC GCGAGCGCGT GCTGCGCGCC TATCCGCAGA CGCTGAAGGA CGCCTACGGC
GGCTACTTCA CCCTGGGCCG GGGCTTCGTG GAGCTCATCG GGCACCGCGG CGTGATGGAC
TTCTTCACGC GTCACGCGCT GCCCCACCCC CACCTGATGC GGTTCGCGCT CAAGCTCCTT
GCTAATCTCA CCGACCGGCG AGGCGACGCG TCAGACCGCA TCATCAACGC TCTGTCGAAG
GTCGCGCCAC CGGCATGA
|
|---|
| Protein sequence | MTVPAAMQRN VAEADADVIV VGAGPAGSTT AFHLAQAGLD VLLLEKTTFP REKVCGDGLT
PRAVKQLIAM GIDIDAPGWV RNKGLRVVGG GLRFELDWPE LSSYPDFGLV RTRQDFDEIL
AANAVRGGVR LLQGVNVTAP ILDDRSGHIV GVVAKKDGEE VSYRSRLVVA ADGNSTRISL
AMGLHKREDR PMGVAVRTYF ESPRHDDDYL ETWLELWDGD TLLPGYGWIF GVGDGTSNVG
LGLLNTSESF KGMDYRDLLR RWVKNMPPEW GYVEENMTTP IRGAALPMAF NRQPHYTRGL
VLVGDAGGMI NPFNGEGIAY AMETGQIAAE TIVQALARTT PAQRERVLRA YPQTLKDAYG
GYFTLGRGFV ELIGHRGVMD FFTRHALPHP HLMRFALKLL ANLTDRRGDA SDRIINALSK
VAPPA
|
|---|
| |