Gene Sros_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0520 
Symbol 
ID8663789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp524723 
End bp526531 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content75% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003336287 
Protein GI271962091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATGGG TCAGATCCGG TGACGTACGG CTGGCACTGT TCGAGGAGGG AGACCCGGCC 
GCTCCCACGG TCCTGCTGCT GCACGGCTAC CCCGACACGC ACCGGGTCTG GGACGAGGTC
GCCGGCCTGT TGCGGGACCG TTTCCACGTG GTCCGCTACG ACGTCCGGGG GGCCGGGCGG
TCCGGCGCCC CGCGCGACGG CGGGGACTAC ACCTACGACC ACCTGGCCGC CGACATGGCG
GCCGTCCTCG ACGCGGTGGG CAAGCCGGGC GTGCATCTCG TGGGGCACGA CTGGGGCTCC
ATCCAGGGCT GGGAGCTGAT CGGCCGGCCG GAGATCAAGG GGCGCGTCAC CTCCTTCACC
TCCTTCGGAG GCCCCGGGCT GGACCAGGCC GCCCACTTCA TGCGGCACGG CCGGCGGGCC
GAGGTCGCCG GGCAACTCCT GCGGTCCTGG TACATCGGGG TGTTCCAGGC CCCGGTGGCG
CCCGAGCTGG CCTGGCGCAC CGTGATGCCG CGCGTCCTGG AGCGGACCAT GCGGATCTCC
GAGGGGATAG CCCCGCGCCC CGGCCATCCG GCGGACACCC TGCGCGAGGA CGGCGTGAAC
GGCCTCGGCC TCTACCGGGC GAACATGTCC ACCGTCCGCC GCACGCCCCG CGCCGAGCCC
GTCGTCGAGA CGCCGGTCCA GCTCATCGAG ACCACCCGCG ACCCCTTCGT CTCGCCCGCG
CTCCTGGCCT CCCTGCGCCC CTGGGTGCCG CGCATGTGGC ACCGGCGGAT CGCCGCGGGG
CACTGGGCGC AGCGCAGCCA CCCCGAGGTG ATCGCCAGGA TGATCGCCGA GTTCGCCGAA
CACGTCGAGC TCGCGGAGGG GGCCGGGCCC GCGGAGGGCG TCGGGGGCGC GGAGGGAGTC
CGGGGGGTGC GGCCGTCCAG GGAGCTGCGC CGCGCCCGGA CGGGAGCGGG AGAGCGCGGG
CCGTACGAGG ACCGGCTGGT GGTGGTCACC GGCGCGGGCG GCGGCATCGG GCGGGCCACC
GCGCGCGCCT TCGCCTCGCA CGGAGCCGAG GTGATCTGCT CCGACATCGA CCTCGCCGCC
GCCCGGCGCA CCGCCGACGG CATCTCCGCG ACCTGGCGTA CGGCGCACGC CTACCGGGTG
GACGTCGCGG ACGTCGCGGA GATGGAGCGG TTCGCCCGGC TCGTCCGGGA CGAGCATGGG
GTGCCCGACA TCGTGGTCAA CAACGCCGGC ATCGCGGTCG CCGGCCCGTT CCTCGACCAC
TCGGTCGAGG ACTGGCGGCG GACCCTGGAC GTGAACCTGT GGGGCGTCAT CCACGGCTGC
CGCCTGTTCG CCGCCCAGAT GGTCGAGCGC GGCGAGGGCG GCCACATCGT GAACATCGCC
TCGCTCGCCG CGTTCGCCCC CAGCAGGGCG CTCCCCGCCT ACTCGACGTC GAAGGCGGCG
GTGAAGATGC TCAGCGACTG CCTGCGGGCG GAACTGGCCG GGCAGGGGAT CGGGGTCACC
GCCATCTGCC CCGGCTTCGT CTCCACCGGG ATCGCGGGCA GCGCGACCTA CCTGGGCGGC
GACGCGGCAC CGCGGGCGCG CGAGGACGCG GCCGCGCGAG CGGACAGGGC GCTGACCAGG
CGGGGATACC CGCCGGAGCG GGTGGCCGCG CACATCCTGC GGGCGGTCCA CCGCAACCGG
CCGGTCGTCG CCGTGAACGC CGAAGGGAAG ATCGGCTACG CGCTCTCGCG GATCTCCCCG
GCCGTCATGC GCCGCCTGGC CAGGCTCTCC GGGGCCGGGG AAATCTCGCG ATTGGCGGAT
AGGGACTGA
 
Protein sequence
MRWVRSGDVR LALFEEGDPA APTVLLLHGY PDTHRVWDEV AGLLRDRFHV VRYDVRGAGR 
SGAPRDGGDY TYDHLAADMA AVLDAVGKPG VHLVGHDWGS IQGWELIGRP EIKGRVTSFT
SFGGPGLDQA AHFMRHGRRA EVAGQLLRSW YIGVFQAPVA PELAWRTVMP RVLERTMRIS
EGIAPRPGHP ADTLREDGVN GLGLYRANMS TVRRTPRAEP VVETPVQLIE TTRDPFVSPA
LLASLRPWVP RMWHRRIAAG HWAQRSHPEV IARMIAEFAE HVELAEGAGP AEGVGGAEGV
RGVRPSRELR RARTGAGERG PYEDRLVVVT GAGGGIGRAT ARAFASHGAE VICSDIDLAA
ARRTADGISA TWRTAHAYRV DVADVAEMER FARLVRDEHG VPDIVVNNAG IAVAGPFLDH
SVEDWRRTLD VNLWGVIHGC RLFAAQMVER GEGGHIVNIA SLAAFAPSRA LPAYSTSKAA
VKMLSDCLRA ELAGQGIGVT AICPGFVSTG IAGSATYLGG DAAPRAREDA AARADRALTR
RGYPPERVAA HILRAVHRNR PVVAVNAEGK IGYALSRISP AVMRRLARLS GAGEISRLAD
RD