Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0336 |
Symbol | |
ID | 8663604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 324616 |
End bp | 326085 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transporter protein |
Protein accession | YP_003336111 |
Protein GI | 271961915 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0230531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCACAC CGCAGCCCCC GACGCTCGAC GGCGGCACCG ACCGTATGAG CGGACGCGCC TGGGCCGTGC TGCTCGTGCT GTGCGGCGCC ATCTTCCTGG AAGGCATCGA CGTGGCGATG CTGAACGTGG CCCTGCCGTC GATCCGAGCC GACCTGGGCA TGTCCACCGG AGCGGTGAGC TGGGTGATGA GCGCCTACGT GCTCGGCTAC GGCGGTTTCA TGCTCCTGGG AGGGCGGACC GCCGACCTGC TGGGCCGGCG GCGGATGTTC CTGTTCTGGC TCGTCGTGTT TCTCGCCTTC TCCGGCCTGG GCGGGGTGGC GAGCGAGGGA TGGGTCCTGA TCGTCGCCCG TTTCGTGACA GGCGTGGCCG CCGCGTTCAT GGCGCCCGCC GGCCTGGCCA TCATCACGAC GAGCTTCCCC GAAGGCCGGC AGCGCAACAA GGCCCTGCTG GTCTACGCGG GAACGGCCGC GGCCGGCTTC TCGCTCGGGC TCGTCGTCGG AGGCCTGCTG ACCGCGATCG ACTGGCGGTG GGTGTTCTTC GCCCCGGTCA TCATGGCGTC GGTGATCCTC CTGGCCGCCC TCCTCCTCAT CCCGGCCGAG AGCCGTCCGG CGCGTTCCCC CCACAGCTTC GACCTGGCCG GGGCCGCCAG CGTGACGGGA GCGATGCTCC TGCTCGTCTT CGCGGTCGTC AGCCTTGAGG ATCCCGGGGC CGGATGGGGC CGGGCGGTCG CCGCCCTCGT CGGCGGCCTG GCGCTGCTGG CCGCCTTCGT GGCGATCGAG CGGCGGTCGG CCGCACCGCT CGTGCGCCTG GGCATCCTGC GTTCGGGTCC GATCGTGCGC GCCAACCTGG GCGCGATGCT GTTCGCCGGC TCGTTCTTCG GCTTCCAGTT CATCGCCGTG TTCTACCTGC AGGAGCTCCG GGGCTGGTCG TCCCTGGAGA CGAGCCTCGC CCTCCTGGCC GTCGGCGTCG ACGCCGTGCT CGCCCCCACC GTCACGCCGC GGCTCGTGAG CCGTTTCGGC AACGCCCGGG TGATCTTCGG CGGCCTGCTT CTCGCCGCCA CGGCCTACGC CATGTTCCTG CCGATCGGGC TCGACTGGAC CTACGCGGCC ATGTTCCCCA CCATGATCAT TCTTGGCCTC GCCTTCGCCC TGGTCTACGG ACCGCTCACC ATCGCCGCCA CGGACGGCGT CACGGAAGAG GAGCAGGGGC TCGCCGGCGG CCTGCTGTAC ACGTCGTTCC AGTTCGGCGC GGCGCTCGGC CTGTCGGCGG TGACCGCCGT CAACGCCGCG GCGGCCGGCG CCGGCGGCTC GCCCCAGGCG GGGCTCGACG GCTTCCGCGC GGCGTTGATC GTGCCGCTGG TCGCGGTACT CCTCGGCGCG GCCGTCACCG CGTCCGGCAT GGGCAGGCGG CGCACGGCGG CCGCCGGGGC CCCTCACGAG GCGCTGGAGG CCGCAGAGGC GTCGCGCTAG
|
Protein sequence | MSTPQPPTLD GGTDRMSGRA WAVLLVLCGA IFLEGIDVAM LNVALPSIRA DLGMSTGAVS WVMSAYVLGY GGFMLLGGRT ADLLGRRRMF LFWLVVFLAF SGLGGVASEG WVLIVARFVT GVAAAFMAPA GLAIITTSFP EGRQRNKALL VYAGTAAAGF SLGLVVGGLL TAIDWRWVFF APVIMASVIL LAALLLIPAE SRPARSPHSF DLAGAASVTG AMLLLVFAVV SLEDPGAGWG RAVAALVGGL ALLAAFVAIE RRSAAPLVRL GILRSGPIVR ANLGAMLFAG SFFGFQFIAV FYLQELRGWS SLETSLALLA VGVDAVLAPT VTPRLVSRFG NARVIFGGLL LAATAYAMFL PIGLDWTYAA MFPTMIILGL AFALVYGPLT IAATDGVTEE EQGLAGGLLY TSFQFGAALG LSAVTAVNAA AAGAGGSPQA GLDGFRAALI VPLVAVLLGA AVTASGMGRR RTAAAGAPHE ALEAAEASR
|
| |