Gene Sros_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0120 
Symbol 
ID8663385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp122665 
End bp123645 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content70% 
IMG OID 
ProductTranscriptional regulator-like protein 
Protein accessionYP_003335918 
Protein GI271961722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.224299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCA TGACCTGGCG CCCGAAGCGG CCGGGCAGGC TGATCGCACG GATCCTCATC 
GGCCTGCTCG TCGTGCTGCT GGTGCTCGCC GTCGGCGGAT ACTTCGTGAT CAATTCGCGG
CTGACCCGGA TCGAGGCGCT CACCGACTAC GACGGCCGGC CCGCCGACAC CCCCGGCACC
AACTGGCTGC TGGTCGGCTC CGACAGCCGC GCCGGCCTGA CCAAGGCCCA GCGCAGGAAA
CTCGCCACCG GCAGCTCCGT CGGCCGCCGG ACCGACACGA TGATGCTGCT GCACATCCCC
GACACCGGCG ACCGCCCGAC CCTGGTCAGC CTCCCGCGTG ACTCCTACGT GCCGATCGAC
GGCCACGGCA GCGGCAAGCT CAACGCCGCC TACGCCTACC AGGACGGCGG TCCCAAGCTC
CTCGCCAAGA CCGTGGAGAA GGTCACCGGG CTCCGGATCG ACCACTACAT GGAGATCGGC
TTCGGCGGCT TCGTGGGCAT CGTGGACGCC ATCGGCGGGG TCGAGATCAA CGTCAAGCAG
GCCATCAAGG ACCCCAAGGC GGGCATCGAC CTGAAGAAGG GCCTGCAGAC GATGGACGGC
GGCACGGCCC TCGGCTACGT CCGCACCCGC GCCACCGGCG CCATCCCCGA CTTCGACCGG
ACCCAGCGCC AGCGCCAGTT CTTCTCCGCG GTGGTGAAGA AGGCGGCCAG CCCCGGAGTC
CTGATCAACC CCTTCCGCTC CATCCCCCTC GCGCTGAGCG CCACCGACTC GGTGGCCGTC
GGGGAGGAGA GCGGCGCCTT CAACCTGCTC TCCCTCGGCC TCGCCATGGG CGACAACCCG
GTGACCACGG TCGTCCCGGT CGGCTCCCTG CCGACCATCA ACGGGGAGGC GGTCGTCAAG
TGGGACACGG CCAAGGCCCT GCGCATGTTC GACGCCCTGG CCGAGGACAG GCCGGTCCCC
AAGGACGCTC TCGGCAAGTA G
 
Protein sequence
MPSMTWRPKR PGRLIARILI GLLVVLLVLA VGGYFVINSR LTRIEALTDY DGRPADTPGT 
NWLLVGSDSR AGLTKAQRRK LATGSSVGRR TDTMMLLHIP DTGDRPTLVS LPRDSYVPID
GHGSGKLNAA YAYQDGGPKL LAKTVEKVTG LRIDHYMEIG FGGFVGIVDA IGGVEINVKQ
AIKDPKAGID LKKGLQTMDG GTALGYVRTR ATGAIPDFDR TQRQRQFFSA VVKKAASPGV
LINPFRSIPL ALSATDSVAV GEESGAFNLL SLGLAMGDNP VTTVVPVGSL PTINGEAVVK
WDTAKALRMF DALAEDRPVP KDALGK