Gene Sros_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0029 
Symbol 
ID8663292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp32503 
End bp33903 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content76% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003335832 
Protein GI271961636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.291175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.776913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCCG TACAGCTCGC CGAACTGCTC GACGGCGTTC CGCCGGGAGT CGGGGAGGCC 
CTCGATCTGG TGACGGGCTT CGACGACTCG CTCGTGCACG GACTCGCCCG GCTGAGCGAG
GAGCGCGCGA CGGCGCTGAC CTCCCTGGCC GGTGCTCTCT CGGCCACGCC GCTCGGCGGG
CGGGTGGGCG AGGCGGCCGG GAAGCTCGCC GCCGGTTCGG TCACGGAGGA GCATCTGACG
GCCCTGGCCG GCGGGCGCGC CGCACTGTTC GGCGCGGTGC ACGACGCCCT GCTCGCCCGC
CTGGACGCCG CGCTGGGAAG GGTCCGGGCG CCGTGGGAGG AACCGCCGGC CACGCCGGCG
CCCGCGGCGG ACAACCTGCT CAGCGGGTGC CGGTCCTGGC TCGGCGAGCT GGCCATCACC
GGATGGCGGG GCGTCGACCA CGACCTCGTC TCCGCCTCAA GCCAGACGAT CGAGGCCCTG
CTGCCCGAAC CCGGGCTGCG CCGGCTCGCG GTGCTGCTCG ACGGTTTGGC GGCAGAGCTG
CGGGCGTCGT GCCCCGTCGG GACGGTGGAA CGCCTGCCCG CCCGGCGGTG GGCCGACCTG
TGGACGCGTG CTCTGCTGCT GTCGCAGGCC GGCGGCCTGC CGGGTGGTTC CGAGTCCGCG
GGCGTGGTGT CGGGACGGCT GCTGATCCTC GGCGTCGACG TGCACGAGCA CGGCACCGCC
GTACAGATGC AGGTGCACGG CGTCCTGGAA CCCGCAGACG GCGCGCCGTC CCGGCTGGTG
CGCACGAGCG TCGCCGCCGC GAAGGTGGAC ACGATCGTCG GCCCGGCCCT GTGGCGGCTG
CTGGGCGGCT ACCCCGCGCT GCTGGGCGCG CTGGCCGAAC GCCGTAGCCT GGACGTCACG
GATCTGCCCC TGCTGGGCAG CGGTGACCTG GTGTGGCACG ACGACCGGGC CCGCGTGGGC
GAGCCCGTCG ACCCGTTCGC CACCGCCAGG CTCCAGCTCG CCGGCGCGCT CGCCCCGGCG
GTGCCGCCCC TGGACCGCCA TCCCGTGCGC ATCGCCGAGC CCGTGCTGGT GGAGGGCTAC
CGCGTCGCCG CCGACGGCAC GCTGGACCTG GGGGGCGGCA CCCTCGCCGT CGACGTCGAC
CGCCTGCCGG CCTGCGGCCC GCTCACTCCC AAGCTGGTGG CCTCCTCCTC GGCGTGCATC
GGCCTGATCC GCTGGGACGG CGGCCGCTGG CTGCTGCAGC CCCTCGCGGT CCAGACGACG
GTCAAGCGCC AGACGGTCGA GAGGCACAAC GGGGACTGGG CGCTGGGCCC CACGGACCCC
AAGGTCGTGA AGGCCGAGGC CAGGGCCGGT GACGCGGTGG CCGTGCTGCG CGAGCGGGCC
GGGCGGTTGC TGAGGCGATG A
 
Protein sequence
MLAVQLAELL DGVPPGVGEA LDLVTGFDDS LVHGLARLSE ERATALTSLA GALSATPLGG 
RVGEAAGKLA AGSVTEEHLT ALAGGRAALF GAVHDALLAR LDAALGRVRA PWEEPPATPA
PAADNLLSGC RSWLGELAIT GWRGVDHDLV SASSQTIEAL LPEPGLRRLA VLLDGLAAEL
RASCPVGTVE RLPARRWADL WTRALLLSQA GGLPGGSESA GVVSGRLLIL GVDVHEHGTA
VQMQVHGVLE PADGAPSRLV RTSVAAAKVD TIVGPALWRL LGGYPALLGA LAERRSLDVT
DLPLLGSGDL VWHDDRARVG EPVDPFATAR LQLAGALAPA VPPLDRHPVR IAEPVLVEGY
RVAADGTLDL GGGTLAVDVD RLPACGPLTP KLVASSSACI GLIRWDGGRW LLQPLAVQTT
VKRQTVERHN GDWALGPTDP KVVKAEARAG DAVAVLRERA GRLLRR