Gene Sros_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0020 
Symbol 
ID8663283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp20939 
End bp23179 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content71% 
IMG OID 
Productheavy metal-transporting ATPase 
Protein accessionYP_003335823 
Protein GI271961627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.668167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG TCACCGATGA CCTGCAGAAC GCGGTCGAAC TCTCGATCGG CGGGATGACC 
TGCGCCTCCT GCGCCAATCG GATCGAGCGC AAGCTGAACA AGCTCGAGGG CGTGACCGCG
ACGGTCAACT ACGCGACGGA GAAGGCGAAG GTCACCTTTC CTGAGGGAAT CGACCCGCAG
GAGCTGATCG CCACCGTGGA GTCGGCCGGC TACACCGCCG CGCTTCCCGC TCCGCCCAAG
AGCGAGGCGG CCGCAGGCGA GCAGGGACCG GAGGACGAGC TCCGTCCGCT GCGCAGCCGC
CTGATCACCT CCGTGGTTCT GGCCGTCCCG GTGATCGCGA TGGCGATGAT CCCGCCGCTG
CAGTTCACCA ACTGGCAGTG GTTGTCGCTG ACGCTGGCCG CGCCGGTGGT TGTCTACGCG
GGCTGGCCGT TCCACAAGGC CGCCTGGACG AACCTGCGCC ACGGCGCGGC GACGATGGAC
ACGCTGGTAT CGCTCGGCAC CATCGCCGCG CTCGGCTGGT CGCTGTGGGC GCTGTTCTTC
GGTACGGCGG GCACGCCCGG CATGATCCAC CCGTTCGCGT TCACCATCGA GCGCACCGAC
GGCTCCGGCA ACATCTACCT TGAGGCCGCG GCGGGTGTGA CCGCGTTCAT CCTGGCCGGG
CGCTACTTCG AGGCCAGGTC CAAGCGTCGC GCGGGCGCAG CGCTACGTGC CCTGTTGGAG
CTGGGCGCCA GGGACGTCGC CGTGCTCCGC GACGGCACCG AGGTCCGCAT CCCCACCGAC
CAGCTCGCCG TCGGCGACCG GTTCGTCGTA CGGCCCGGCG AGAAGATCGC CACCGACGGC
GTGGTCGAGG AGGGCTCCTC TGCGGTCGAC GCCTCCATGC TCACCGGCGA GTCCGTGCCC
GTGGAGGTGC GGCCGGGCGA TGCCGTCACC GGCGCCACCG TGAACGCGGG CGGACGCTTG
GTCGTCCGCG CCACCCGGAT CGGCTCCGAC ACCCAGCTGG CCCAGATGGC CAAGCTGGTG
GAGGACGCCC AGACCGGCAA GGCGCAGGTG CAGCGGCTGG CCGACCGGAT CTCCGGCGTC
TTCGTCCCGG TCGTGATCGC CCTGGCCCTC GGCACTCTGG GCTTCTGGCT GGGCACAGGG
GATGGCGTGG GCGCGGCCTT CACCGCCGCG GTGGCGGTGC TGATCATCGC CTGCCCGTGC
GCTCTCGGAC TGGCCACGCC GACGGCACTG CTGGTCGGCA CGGGCAGGGG AGCACAGCTC
GGCATCCTGA TCAAGGGCCC CGAGGTGCTG GAATCCACCC GCCGGATCGA CACCGTCGTG
CTGGACAAGA CCGGCACGGT CACCGAGGGC AGGATGACCC TCACCGACGT GCACCTGGCC
GACGGCGAGG ACGAGAACGA GGTCCTGCGC CTGGCGGGCG CCCTGGAGCA CGCCTCCGAG
CACCCGATCG CCCAGGCCGT CGCCAAGGGA GCGAGCGAGC GGGTCGGCGC GCTTCCCACA
CCGGAGGATT TCGCCAACGT CGAAGGGCTC GGCGTGCAGG GCATCGTCGA CGGTCACGCC
GTGCTGGTCG GCCGGCCCAA GCTGCTCGCC GAGTGGTCAC AGCACCTCAA CGCCGACCTG
GAGCGTTCCC TGCACGCCGC TCAGGCGGCA GGCCGTACGG CTGTCGCGGT CGGCTGGGAC
GGCAAGGCCC GAGCCGTCCT CGTGGTCGCC GACACGGTCA AGCCGACCAG CAAGGAGGCC
ATCCAGCGGT TCCGCGCCCT CGGCCTCACG CCCGTCCTGC TGACCGGCGA CAACGAGGCG
GTGGCCAAGA GCGTCGCGGC CGAGGTCGGC ATCGACGAGG TGATCGCCGA GGTGCTGCCC
GCTGACAAGG TGGACGTCGT CAGGAAATTG CAGGGCGAAG GCAAGGTCGT GGCGATGGTC
GGCGACGGCG TCAACGACGC CGCCGCGCTC GCCCAGGCCG ACCTCGGCCT CGCGATGGGC
ACCGGCACCG ACGCGGCGAT CGAGGCCTCC GACCTCACGC TGGTCCGCGG TGACCTGCGG
GTGGCGGCCG ATGCCATCAG GCTGTCGCGC AGGACGCTCG GCACGATCAA GGGCAACCTG
TTCTGGGCCT TCGCCTACAA CGTGGCCGCC CTGCCCCTGG CGGCGATGGG CCTGCTCAAC
CCGATGATCG CGGGCGCCGC GATGGCGTTC TCCAGCGTCT TCGTGGTCAC CAACAGCCTG
CGGCTGCGCC GCTTCAAGTA A
 
Protein sequence
MTSVTDDLQN AVELSIGGMT CASCANRIER KLNKLEGVTA TVNYATEKAK VTFPEGIDPQ 
ELIATVESAG YTAALPAPPK SEAAAGEQGP EDELRPLRSR LITSVVLAVP VIAMAMIPPL
QFTNWQWLSL TLAAPVVVYA GWPFHKAAWT NLRHGAATMD TLVSLGTIAA LGWSLWALFF
GTAGTPGMIH PFAFTIERTD GSGNIYLEAA AGVTAFILAG RYFEARSKRR AGAALRALLE
LGARDVAVLR DGTEVRIPTD QLAVGDRFVV RPGEKIATDG VVEEGSSAVD ASMLTGESVP
VEVRPGDAVT GATVNAGGRL VVRATRIGSD TQLAQMAKLV EDAQTGKAQV QRLADRISGV
FVPVVIALAL GTLGFWLGTG DGVGAAFTAA VAVLIIACPC ALGLATPTAL LVGTGRGAQL
GILIKGPEVL ESTRRIDTVV LDKTGTVTEG RMTLTDVHLA DGEDENEVLR LAGALEHASE
HPIAQAVAKG ASERVGALPT PEDFANVEGL GVQGIVDGHA VLVGRPKLLA EWSQHLNADL
ERSLHAAQAA GRTAVAVGWD GKARAVLVVA DTVKPTSKEA IQRFRALGLT PVLLTGDNEA
VAKSVAAEVG IDEVIAEVLP ADKVDVVRKL QGEGKVVAMV GDGVNDAAAL AQADLGLAMG
TGTDAAIEAS DLTLVRGDLR VAADAIRLSR RTLGTIKGNL FWAFAYNVAA LPLAAMGLLN
PMIAGAAMAF SSVFVVTNSL RLRRFK