| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3983 |
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| Symbol | |
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| ID | 5081466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4629919 |
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| End bp | 4631373 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640501195 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001185485 |
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| Protein GI | 146295061 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA CGGCCGCACA ACTCAAGCAA CTATTGTCGC TGGGCGAAAA TCAAACCCTT
GAATACCTTA CAAGCTGCGA CTTAAAACAT TGCGGCCCGC AAGTGTGCGC CTTTTTAAAT
ACCCAAGGCG GTTACCTGCT ATGTGGAGTC GATGATAAAG GCCAAATCAA GGGCGTAAAA
GATGCCGTGC AAGTAGCTGA ACAGCTCGAA AGCGAGCTTA AATCGGCGAT TCAACCGCCA
GTACTGTTTT CGGTAGAAGT ACAGCAAGTC GAAAACAAAC AGCTATTAGT GGTTGAAGTG
CCGGCCGGCA AAGACATTCC TTACGCCTTT AACAGTGATA TCTACATACG TGCCGGCGAA
CAAACCCAAA AGGCCGATGT CGATACCATC CGCGACATGG TTATGCGCAA GCAAGTAGAG
CCTACCCGCT GGGAGCGTTT GTTCTCGTCT GAACTCGACG AACAAGGTTT ATCAGCCAGC
GCTTGTAAAA AACTGCTATC CGCTAAACGC ATTCCCAAAG AAGTCGCGCA AGCCGAACAA
GGCTTGCTGC ACCAATTGCA ATTATTATCC TTGGCCAAAT ACGGCCGCTT AACCAATGCC
GCCGATGTAT TACTGGCCAA CGCGCCGGGT AAGCGCCATC CGCAAGCCCG CGTGCGTGCG
GTGTGTTATC GCCATAAGGC CGACGACGAA TATCAGGATT TACAGCACCT CGATGGCCCA
ATGGCCGAGG TGATCGAGCA GCTGATTACC TTTGTGATGC GCAATACGCC ATCGCGCGCA
CGCTTTAGCA GTGCCAATAA TCAGCGCGAA GACATCCCCA TGTACCCAGA GCAAGCGGTA
CGCGAAGCCA TTGTCAACGC CTTTGCCCAC CGCGATTACA GCAACTTTGC CGGGGGCATT
AAGGTTGAAG TTAGCCCAGC GCACCTAAAA ATATGGAACG CCGGTGCGTT TCCACAAGGC
ATCGACGAGC ACAAGATTCA GCAAGGCCAT ATCTCGGTAC TGCGTAACCC CGACATCGCC
CACGGCTTAT ACCTGCAAGG CTATATGGAA AAGCTTGGCC GCGGCAGTGT GGTCATTCAA
CAAGCCTGTA AAGATGCGGG CCTACCTGCG CCAAAATGGC ACTCCGATAG CAGCTCCGGC
GTGACTTTGA CCCTGTTCGC CACGGAAGTC ACCACGGAAG TCACCACGGA AGTCACCACG
GAAGTCACCA CGGAAGTCGC ACGGATGATC AGCCTCATGA GCCAAGAGCA TAGCCGCGAC
GAATTAATGG CATTAATGGC ACTGAAAAAC GCCGAGCATT TCCGTAAACA CTACTTAAAA
CCGGCACTGG AGATCACCCC AGCCTTGGTA GAAATGACCA TTCCAGACAA ACCAACCAGC
CGTAACCAAA AATACCGTTT AACAGCGCTT GGCCAGCAGC TAAAGCAGCA ACTAAGCGAT
AAGAAGACAT CATGA
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| Protein sequence | MSKTAAQLKQ LLSLGENQTL EYLTSCDLKH CGPQVCAFLN TQGGYLLCGV DDKGQIKGVK
DAVQVAEQLE SELKSAIQPP VLFSVEVQQV ENKQLLVVEV PAGKDIPYAF NSDIYIRAGE
QTQKADVDTI RDMVMRKQVE PTRWERLFSS ELDEQGLSAS ACKKLLSAKR IPKEVAQAEQ
GLLHQLQLLS LAKYGRLTNA ADVLLANAPG KRHPQARVRA VCYRHKADDE YQDLQHLDGP
MAEVIEQLIT FVMRNTPSRA RFSSANNQRE DIPMYPEQAV REAIVNAFAH RDYSNFAGGI
KVEVSPAHLK IWNAGAFPQG IDEHKIQQGH ISVLRNPDIA HGLYLQGYME KLGRGSVVIQ
QACKDAGLPA PKWHSDSSSG VTLTLFATEV TTEVTTEVTT EVTTEVARMI SLMSQEHSRD
ELMALMALKN AEHFRKHYLK PALEITPALV EMTIPDKPTS RNQKYRLTAL GQQLKQQLSD
KKTS
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