Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3945 |
Symbol | |
ID | 5081428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4588296 |
End bp | 4589906 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640501159 |
Product | transposon Tn7 transposition protein TnsC |
Protein accession | YP_001185449 |
Protein GI | 146295025 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGACG TTACGCAAGG TCGGATTCCT CATGCCGTTT ATATTGATCC CGGATTACCT GAATATCGGG ATAATCCGTT GATTGCTTCT CTGCCTCCAA TTTTTGATAC CAAGCAGGTT ATTACTAAGC TTAGGTTAAA ACCCTTGTAT GACAGTGCCG AGCGTAATTT GGATGGTCGA CTGAGAGTGC ATGCTATTGC TAGGTTGCTG AATCGGTTTT TTCAACCGTT AAGCCACCAT CTGGAATTAG AGCAAAAAAT ATCGCTAATC CTAAGGCAAG GCTATCTGGG ACGTAATCCT GAGCAAGGCT CATACCACCT TCATCTGCAA AATGGTTTTA AGCGGATTCA GGAAGAAGAT CTTGATGCTT TTGTATTTGA CCAGGCAAGG TCGAGCGCAA ACAGCTTGTC ACTATTTGGC TGCTCCGGCT GTGGCAAGTC TGTCACAATC AATCGAATTC TTTCGGTTTA TGAACAAGCG ATTTTTCACC CAGAACACAA CATCACTCAA CTAACTTACC TGAAAATAGA ATGCCCAGTC GATGGTGATT TGGATGAGCT TTGTCTGAGC TTTTTTAATG AGGTGGACCG GGTGCTACAC ACTCAGTACA GCACCTCACA TGGCCGGAAA AAGCTGGGAA CCAAGCGTTT GATGGCCAGC ATGTGCCAGA TCGCCAACCT GCATGCTCTG GGCGTGTTGA TAATCGATGA AGTGCAAAAC CTGAATGAAG CAAAATCCGG TGGTGCAGAA AAAATGCACA ACTTCTTTGT GTCTTTAGTG AACACTATCG GTGTGCCAGT GATTCAGGTG GGTACCCACC GTGCACGAAA ATTCTTTCAG CGAACATTCC GCGCTGCGCG TCGTATAACC GGATTTGGCA GTTTGCTGTG GGACAGACTG CCGAATGACC ATCAGTGGCG TCAGTTATTA AAACTGCTTT GGCAATATCA GTGGTTACGA AGTGCTGAAC CGATAAATGA TGAGCTCGTG GGTACAATGT ACGACCTGAC TCAGGGTGTA ATGGATATAG TGGTCAAGCT TTATGTACTG GCTCAGGTCA GGGCTATAGT CACCGGCATG GAGCGCATCA CATCAGAGCT GCTTAAGCAG GTTTATCATG ATGAATTCAA ACCGGTTCAT CCGATGCTAG CGGCTTTACG CAGCAACAAC CCGGGATTAC TGGAACAATA CGATGATCTG CTGATGCCTG AAATAGAAGC CAGAATGTTA TCAATGGTAT CGTCACTCGA ACAGGCTGAT ACGTATGTAG ACCGGCCAGA GATTTCAACC GATAAAAGTA AAAAACTGCT CGTCTTGCTG TCACAAATGG ATATTCCGGA AGACATCGCT ATTCCTTTGG TTGATAGGGT AATTAGCCGA CATCCGGAAC TATCCGTGGC GGCGCTGATG CACAAAGTTA CTGAGTATAC GGCGGATGTG ACGGCTGAGC CCCCGAAAAT AAACCGGATA AAAAGAACTC AATGGCTGGA GTTACCAACC AATGATTTAC GTTATTTGTA CGCCAGCAGC GATAAGAACA ATGTATATCA GTTATTTAAG AATCAGGGGC TGATATATGA CCTTAAATCA GTTAGTAACA GGACGGGTTA A
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Protein sequence | MTDVTQGRIP HAVYIDPGLP EYRDNPLIAS LPPIFDTKQV ITKLRLKPLY DSAERNLDGR LRVHAIARLL NRFFQPLSHH LELEQKISLI LRQGYLGRNP EQGSYHLHLQ NGFKRIQEED LDAFVFDQAR SSANSLSLFG CSGCGKSVTI NRILSVYEQA IFHPEHNITQ LTYLKIECPV DGDLDELCLS FFNEVDRVLH TQYSTSHGRK KLGTKRLMAS MCQIANLHAL GVLIIDEVQN LNEAKSGGAE KMHNFFVSLV NTIGVPVIQV GTHRARKFFQ RTFRAARRIT GFGSLLWDRL PNDHQWRQLL KLLWQYQWLR SAEPINDELV GTMYDLTQGV MDIVVKLYVL AQVRAIVTGM ERITSELLKQ VYHDEFKPVH PMLAALRSNN PGLLEQYDDL LMPEIEARML SMVSSLEQAD TYVDRPEIST DKSKKLLVLL SQMDIPEDIA IPLVDRVISR HPELSVAALM HKVTEYTADV TAEPPKINRI KRTQWLELPT NDLRYLYASS DKNNVYQLFK NQGLIYDLKS VSNRTG
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