Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3899 |
Symbol | |
ID | 5081329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4524256 |
End bp | 4525521 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640501111 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein |
Protein accession | YP_001185404 |
Protein GI | 146294980 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0992483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGTT TTCTCTATTC CACGATTTTA TATTTGTTAT CTCCTTTGTT AGTTATCTAT TTAGCCTTTC GTGGGATCAA AAGTTCGGAT TACCGCGGTC GTTGGGGGGA GCGCTTTGGG TTAACTCGAC TAAAATCGAC GGATTTACTG ATCCATTCAG TCTCTATGGG GGAAACGCTG GCAGCCATTC CATTGATCCG TTTGATTATG CAATCACACC CTGAGTTAAG CATTACGGTT ACCACAACCA GTCCAACGGG GTCTGCCGAA GTGCGCAAAG CGTTTGGTGA TAGGGTGCAA CATTGCTATC TCCCCTTTGA CTTACCTTGG TGTGTGAATC GTTTTTTGCG CCAAGTTTCG CCCAAGTGGT GTGTGATTAT GGAGACTGAG CTGTGGCCTA ACTTAGTTGC GATTGCGGCC AAACAAGGTG TGCGTTTGAT GCTCGCCAAC GCGAGGCTTT CGGCCAAGTC TGCGGCGCAA TATGCTCGGT ATCCTAAACT TAGTCTGCCG ATGCTGCAGC GATTCGATGT TATTGCGGTG CAGACTCAAG TGGAAGCGCA GCGTTTTGTC GAGTTAGGTG TATCGCCAGA CAGAGTGACG GTATGTGGTA GCTTGAAGTT TGATCTCTGT ATTACGCCAG AGCGTTTAGC CAACGCTAAA CTGTTACGTC AGGCTTGGGG GCGTGAAACA TCACCAATTT GGGTCGCGGG CAGTGTGCAC CCTGGTGAGT TTGACGCCAT GCTTACCGCC CATCGGCACT TATTGGCTCA GTGGCCAGAT GCTTTGCTGA TTATCGTCCC GCGTCATCCA GAACAGTTTG CTAATCTTGC TGAAATAGTT AAAAACCAAG GGTTTGAATC AGTTCTCCGC AGTAATCATC TTCCCGTGAC GGTAACGACT CAAGTGCTGG TGGGCGATAC CATGGGTGAG TTATTGACCT TTTATGGTGC GGCGGATCAA GCCTTTGTCG GGGGGAGTTT GATTCTCCAT GGTGGTCATA ATCCATTGGA ACCTATTGCC ATGGGCATAC CTGTAATGGT TGGACCCAAT TACCGAGATT TTGCCCAAAT TACTCAAATG CTATCGGATG CAGGAGGGCT AAGAATTGTT TCTTCGGCGG ATGAACTTGG GGCAAACTTG ATTGAATATT TTGCAGAACC TGAGCGATGT CAGCAGGCCG TGAATGCAGG ACTCGCTGTG GTCGAGGCAA ATCGCGGTGC GCTTGAACGG CAATTTGAGC TTGTGCAATC CTTATTAAAC GCTTAA
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Protein sequence | MNRFLYSTIL YLLSPLLVIY LAFRGIKSSD YRGRWGERFG LTRLKSTDLL IHSVSMGETL AAIPLIRLIM QSHPELSITV TTTSPTGSAE VRKAFGDRVQ HCYLPFDLPW CVNRFLRQVS PKWCVIMETE LWPNLVAIAA KQGVRLMLAN ARLSAKSAAQ YARYPKLSLP MLQRFDVIAV QTQVEAQRFV ELGVSPDRVT VCGSLKFDLC ITPERLANAK LLRQAWGRET SPIWVAGSVH PGEFDAMLTA HRHLLAQWPD ALLIIVPRHP EQFANLAEIV KNQGFESVLR SNHLPVTVTT QVLVGDTMGE LLTFYGAADQ AFVGGSLILH GGHNPLEPIA MGIPVMVGPN YRDFAQITQM LSDAGGLRIV SSADELGANL IEYFAEPERC QQAVNAGLAV VEANRGALER QFELVQSLLN A
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