| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3864 |
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| Symbol | |
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| ID | 5081246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4485824 |
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| End bp | 4487221 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640501076 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001185369 |
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| Protein GI | 146294945 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000323953 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGA GCAAAATAGG CCTCTGGTCC CTCACTGCGC TGGTGTTCAG CTCCATGGTG
GGGGCGGGCA TCTTCAGCTT GCCCCAGAAC ATGGCCGAGG TGGCCGGTGC CCGCGCCGTG
CTGATCGGCT GGGGCGTGAC CGGGGTAGGT ATACTGGCGC TCGCCGCGAG TTTTCTCTAC
CTGTCGCGGC TAAGACCGGA TCTCGATGGG GGCATCTACA GCTATGCCCG CGCAGGCTTT
GGGGAGCTGG TGGGTTTTTT CTCCGCCTGG GGCTACTGGC TGTGCGCCAC CATAGGTGTG
GTGGGTTACC TGGTGATCGC CTTCGCCGCC CTTGGCAGCT TCGTCGATAC CCCTGAACAG
ATTTGGTTTG GCGATGGCAA TACTCTGGCG GCTTTTATCG GCGAGTCCTG CATCCTCTGG
GCCGTGCATC TGCTGGTGGC CCGTGGCGTG CAACAGGCTG CCCTGTTCAA TCTGGTGGCA
ACCCTGGCCA AGAGCCTGCC GCTGCTGCTG TTCATCCTGT TCGCCTGCTA CTGGTTCGAC
CCTGTGACCT TTGCGACGGA TCAGGGGGGC AGCACGCTTG CTGTGCCGGT CTCCGAGCAG
GTGCGCAACA CCATGTTGAT CACCCTCTGG GTCTTTACCG GCATCGAAGG GGCGGCCGTC
TTGTCGGCCC GCGCCAGGAA CAAGCGGGAC GTGGGCACGG CCACAGTGCT CGGCGTGGTG
CTGGCGCTGC TGCTTTATGT GCTCATCTCG GTACTGGCGC TGGGGATATT GAGTCGCCCC
GAGCTCGCGG CCCTGCCAAA TCCCTCCATG GCGGGGCTGA TGGCCCAGAT GACGGGATCC
TGGGGCAAGG TGCTGATCAG TGTCGGCCTC ATCGTCTCTG TACTCGCTTC TTACGTGAGC
TGGACCCTGT TCTCGGCAGA GGTGCCCTTC AGCGCTGCTC GCCACGGCGC TTTCCCGGCC
ATCTTCCGGC GCCAGAATCG CAACGGCACC CCCATAGCGT CGCTGTGGCT CACCAGCCTG
ACGGTGCAGG GCTGCCTGCT GCTGGTGTGG CTGCTCGGCA AGGGGTATAC CAACCTGCTG
CTCATCTCCA CCTCCATGAT ACTGGTGCCC TATCTGCTGA TCGGCCTGTT CCTGCTCAAG
CTTTCCTTGA GTGGCGAGGG CAATGGCCTG ATGCGGACAG TGGCACTGGT GTCGAGCGGT
TATGGCCTCT GGCTGCTCTA TGCCGCTGGT GTGGAATACC TGCTGCTCTC CTTGCTGCTG
TACGGGCCGG GCCTGCTGCT GTTTCTCTAT AGCCGCCGAC AGCTTGGTGA CCATCAGCGG
CTCAGTGGTC GCGAACGACT GCTGGCCGGG ATAACGCTGG TGAGCCTTAT TCCCGCACTC
TGGTCATTTG GTTTTTGA
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| Protein sequence | MKESKIGLWS LTALVFSSMV GAGIFSLPQN MAEVAGARAV LIGWGVTGVG ILALAASFLY
LSRLRPDLDG GIYSYARAGF GELVGFFSAW GYWLCATIGV VGYLVIAFAA LGSFVDTPEQ
IWFGDGNTLA AFIGESCILW AVHLLVARGV QQAALFNLVA TLAKSLPLLL FILFACYWFD
PVTFATDQGG STLAVPVSEQ VRNTMLITLW VFTGIEGAAV LSARARNKRD VGTATVLGVV
LALLLYVLIS VLALGILSRP ELAALPNPSM AGLMAQMTGS WGKVLISVGL IVSVLASYVS
WTLFSAEVPF SAARHGAFPA IFRRQNRNGT PIASLWLTSL TVQGCLLLVW LLGKGYTNLL
LISTSMILVP YLLIGLFLLK LSLSGEGNGL MRTVALVSSG YGLWLLYAAG VEYLLLSLLL
YGPGLLLFLY SRRQLGDHQR LSGRERLLAG ITLVSLIPAL WSFGF
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