Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3863 |
Symbol | |
ID | 5081245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4483413 |
End bp | 4485614 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640501075 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001185368 |
Protein GI | 146294944 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000567085 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTACCGT ATGCGTATCC TAAAGACACT ACTGAAATGA CTATGCGCTT CAATCTACTT CCTCTCGCTA CAGCTATTAC TTTGGCGTTA AATCCTCTGT CCGTTTTGGC TGAGGAGCAA TCTTCTACAG AAACAAAAGA TCAGAATATC GAAAAAATTA CTGTGATGGG TAAATATACC GTCAGTAGAA CCATTGACAC TGCCACAGGT TTGGGGCTGT CACTGCAGGA AACTCCGCAG TCTGTCAGCA TTATGACGGC TGAGCGGATT CAAGATCAGG CACTCAATAC CGTTGTCGAT GTTGTTAACA ATACCGTAGG TTTATCTTCC TCTAAAACAG ATAACGTCCG AAATGGTTTT ATGGCTCGTG GTTTTGAGGT ACAGAATTAC CAGATAGACG GTGTGCCATT GTCTTGGAGT TTAGGCGGTG ATGCGGGTGA GACAGTATCT GATATTTCCT TATATGAACG CGTTGAAGTC GTTCGTGGTG CAACAGGATT ATTGACGGGT GCAGGAGATC CTTCCGCGTC TATTAACCTC GTACGAAAGC ATGCCGATAG TGCTGAACTT AAGGGCTATG TCGATGTTGC TACGGGTAGC TGGGATAAAA AACAAGTTAC TGCGGATGTT TCCAATGGCC TTAACGACAG TGGCAGTGTG CGTGGTCGCA TGGTGGCTAA ATATGTCAAT AGCGATTCCT ATCAGGATCT TTATCAAGAT CGTAAGACCA TTCTTTATGG TGTAGTGGAT TCAGACATCA CTGAAAACAC TATGCTGCGC GTCGGCGGTA GTTACAATAA CAATAACCCC AAAGGAGCGA TGTGGGGCGC CTTACCCGCA ATGTTCAGCG ATGGTTCTGC GACAGATTGG GATGTTTCTG CCACAACGGC CGCAGACTGG AGTCGTTGGG AAACCACCAA CATCAACTAT TTTGCTAATT TGAATCATTA TTTCAGTAAT GGTTGGCAAT TGGTGGCGAA CTATAATCGC ATGGAATACG AAACTACCAC CAAAATGATC TATATGTCTG GTTTGCTGAA TAAAGAAACC GGTGCAGGAT TAACAGGTCA GCGTTATCAC AGCCATGGTG AAAGTAACTC CGATAATTTT GATTTCCAAT TGAAAGGGGA TTACCAGCTC TTTAACCGTG AGCATCAATT TGTGGCTGGC GCTTTGTACA GCAAACAGAA ATCCTATGCT GATACCTATG AGCCTATCCG TGAAGACATG ACGGGTTGGG ACTCAAAGGT GGTTGAAAAC TTTTATGATT GGCGCAGTAA CACCTTCGAT GAGCCGCAGT GGTCAACGGA CGCTAATCGT CAGTTAAATA TGGATACTGA ACAGAAAGGT TTCTACGCGG CAACTCGGCT GACGATTACC GATGATTTTA AAATCATTGC TGGTGGTCGT ATTTCTAGCT GGAATCGTGA AGGGGTCAGC TATGGTACTA GCACTAATTT TGGTGATGAT GGTGTATTTG TACCTTATGT TGGCGCACTG TATGACATTA ATAAAGAGCA TCGGGTTTAC GCCAGTTATA CAGAGATATT TAATCCGCAG AATGTGACTA ATGCCTACGG AGAGTATATA GATCCCTTAA AAGGCAAAGC CTATGAAGTG GGTTTGAAGA GCGCTTATTT GGACGATCGT CTACATACTA CAGTAGCGCT GTTCAAAATT GATCAGGACA ATCTGGCAAC GCCAGATGGA ACTGTCACCA TTGACGGCAA ACCAGTGACT AATTACAAGG CTGCTCAAGG TACTGAAAGT ACTGGCTTTG AGTTAGAAGT TGTGGGTGAA TTTATTGATG GCTGGAATAT TTCGGCTGGC TATTCTCAAT TCACCGCTGA AGATGCCGAA GGCAGTAAAG TGGAGACCAC GAGCCCTCGT AAACAGTTTA AACTCTTTAC TACCTATCAG TTTGTCGATC ATTTACCTGA GTTGACCGTG GGTGGTGGTG TTAACTGGCA GAGCGATAGT TACTCAGAAA ACGGTGGCGT TGTAATTGAG CAGGATGCAT ATTCGCTTGT TAACCTGATG GCTCGTTATA ATCTAGCGGA AAATATGGAT CTGCAACTGA ACCTCGAAAA CCTGCTGGAT GAAAAATACT ATGCCTATAT GTCAGCTTCA GGACTTTCAT ACAGCATATA TCACTATGGT ACCCCTAGAA ATGTAACTGT TAGTTTTAAC TATCGTTTCT AA
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Protein sequence | MLPYAYPKDT TEMTMRFNLL PLATAITLAL NPLSVLAEEQ SSTETKDQNI EKITVMGKYT VSRTIDTATG LGLSLQETPQ SVSIMTAERI QDQALNTVVD VVNNTVGLSS SKTDNVRNGF MARGFEVQNY QIDGVPLSWS LGGDAGETVS DISLYERVEV VRGATGLLTG AGDPSASINL VRKHADSAEL KGYVDVATGS WDKKQVTADV SNGLNDSGSV RGRMVAKYVN SDSYQDLYQD RKTILYGVVD SDITENTMLR VGGSYNNNNP KGAMWGALPA MFSDGSATDW DVSATTAADW SRWETTNINY FANLNHYFSN GWQLVANYNR MEYETTTKMI YMSGLLNKET GAGLTGQRYH SHGESNSDNF DFQLKGDYQL FNREHQFVAG ALYSKQKSYA DTYEPIREDM TGWDSKVVEN FYDWRSNTFD EPQWSTDANR QLNMDTEQKG FYAATRLTIT DDFKIIAGGR ISSWNREGVS YGTSTNFGDD GVFVPYVGAL YDINKEHRVY ASYTEIFNPQ NVTNAYGEYI DPLKGKAYEV GLKSAYLDDR LHTTVALFKI DQDNLATPDG TVTIDGKPVT NYKAAQGTES TGFELEVVGE FIDGWNISAG YSQFTAEDAE GSKVETTSPR KQFKLFTTYQ FVDHLPELTV GGGVNWQSDS YSENGGVVIE QDAYSLVNLM ARYNLAENMD LQLNLENLLD EKYYAYMSAS GLSYSIYHYG TPRNVTVSFN YRF
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