| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3859 |
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| Symbol | |
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| ID | 5081241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4479371 |
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| End bp | 4481350 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640501071 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001185364 |
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| Protein GI | 146294940 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTC TCGGTAAATT AAGCTTAGAT GCGATTCCGT ATCACGAGCC CATCATCATG
GTGACCCTAG CGGTCGTCGC AGTGGTAGGT TTGTATATCG CAGCCTTGAT CACTAAACAC
AAAAAATGGA GTGTACTCTG GAATAATTGG TTAACCTCAG TTGACCATAA ACGCCTCGGT
ATCATGTACA TAGTGTTGGC TTTGGTGATG CTCATTCGTG GCTTCTCCGA TGCCATTATG
ATGCGTACCC AGCAAGCACT CGCCACCAAC GGCGCAGCAG GTTATCTGCC GCCTGAACAT
TACGACCAGA TCTTCACCGC CCACGGCGTG ATCATGATTA TCTTTATGGC GATGCCATTT
ATGATAGGTC TAATGAACTT AGTCGTGCCG CTGCAGATTG GCGCACGCGA CGTTGCCTTC
CCCTTCTTGA ATAACCTCAG TTTCTGGCTG ACCGCCTCTG GCGCTGTGCT GATTAATATT
TCATTGGGTT TAGGTGAATT TGCTAAAACA GGTTGGGTGG CGTATCCCCC CCTCTCAGAA
CTGGCTTACA GTCCGGGGGT TGGAGTCGAT TACTATATCT GGGCACTGCA AATTTCAGGC
ATAGGGACAA CCTTAACCGG GGTGAACTTT ATCGCCACCG TACTTAAGAT GCGCGCCCCC
GGCATGAAGC TGATGCAAAT GCCAATCTTC ACTTGGACTT GTACTTGGGC GAACATATTG
ATCGTCGCGT CATTCCCAAT CTTAACCGCC GTGTTAGCTA TGTTAACGCT CGACCGTTAT
ATGGATTTCC ACTTTTTCAC CAATGACGGT GGCGGTAACG CCATGATGTA TATCAACCTA
TTTTGGGCGT GGGGACATCC TGAAGTTTAC ATCCTGATTT TGCCTGCTTT TGGTATTTTC
TCCGAGGTGA TCTCAACCTT TACGGCTAAG CGTTTGTTTG GTTACACCTC TATGGTGTGG
GCGAGCGGTG CGATTTCAAT TTTAGGTTTC ATCGTTTGGT TACACCACTT CTTCACTATG
GGCTCAAGTG CCAACGTCAA CGCCTTCTTC GGGGTGATGA CTATGGTGAT TGCGGTTCCA
ACCGGGGTAA AACTGTTTAA CTGGTTGTTC ACTATCTACC GTGGCCGCCT AAGGTTAACT
GTACCTGTGT TGTGGACGCT AGGCTTTATG GTGACTTTCA CCATAGGCGG TATGACAGGT
GTGTTATTAG CCTTACCGGG AGCCGATTAC GTTCTACATA ACAGTTTGTT TTTAATCGCG
CATTTCCATA ACACTATTAT TGGTGGTGCG GTATTTGGTT ACTTAGCAGG CTTTGCTTAC
TGGTTCCCGA AAGCGACAGG TTTCCACTTG AATGAGCGTT TAGGTAAAGC GTCATTCTGG
TGCTGGCAAA TCGGTTTCTA CGTGGCCTTT ATGCCGCTGT ACGTATTAGG CTTTATGGGT
ATGACGCGCA GAATTAGCCA TACGGATAAC CCAACATGGA ACCTGTGGAT CTACTTAGCC
GCTGTGGGTG CTTGCATCAT CATGGTCGGT ATCATTCTGC AGTTTATCCA ACTGTACGTG
AGTATCCGTG ACCGCGACCA AAACCGCGAT ACTACGGGCG ATCCATGGAA TGGCCATACG
TTAGAGTGGT CAACCGCTTC ACCACCCCAG TGCTATAACT TCGCTAAGCT GCCACAGGTT
GCTGATATCG ATGCCTTTAC CGATGCGAAA GAAAAAGGCT TGGCTTATCA AGGCCTCAAA
CACTATCAGC CAATCCATAT GCCGAAAAAT ACCTCAAGCG GTATCTTAAT GGCGCTGGGG
ATCACTGCCG CAGGTTTTGC CGCTATTTGG CACATTCTCT GGTTAGCCAT TGTGGGCTTA
GTGGGCGCGT TTATCGTGTT CTTATTCCGT GCCTATAACA ATGACGTCGA CTATTACGTG
CAACCCGATG AAGTGGCTCG CATTGAAAAT GCCCACTTAA ACAATGTAGT AAGGGGCTGA
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| Protein sequence | MSFLGKLSLD AIPYHEPIIM VTLAVVAVVG LYIAALITKH KKWSVLWNNW LTSVDHKRLG
IMYIVLALVM LIRGFSDAIM MRTQQALATN GAAGYLPPEH YDQIFTAHGV IMIIFMAMPF
MIGLMNLVVP LQIGARDVAF PFLNNLSFWL TASGAVLINI SLGLGEFAKT GWVAYPPLSE
LAYSPGVGVD YYIWALQISG IGTTLTGVNF IATVLKMRAP GMKLMQMPIF TWTCTWANIL
IVASFPILTA VLAMLTLDRY MDFHFFTNDG GGNAMMYINL FWAWGHPEVY ILILPAFGIF
SEVISTFTAK RLFGYTSMVW ASGAISILGF IVWLHHFFTM GSSANVNAFF GVMTMVIAVP
TGVKLFNWLF TIYRGRLRLT VPVLWTLGFM VTFTIGGMTG VLLALPGADY VLHNSLFLIA
HFHNTIIGGA VFGYLAGFAY WFPKATGFHL NERLGKASFW CWQIGFYVAF MPLYVLGFMG
MTRRISHTDN PTWNLWIYLA AVGACIIMVG IILQFIQLYV SIRDRDQNRD TTGDPWNGHT
LEWSTASPPQ CYNFAKLPQV ADIDAFTDAK EKGLAYQGLK HYQPIHMPKN TSSGILMALG
ITAAGFAAIW HILWLAIVGL VGAFIVFLFR AYNNDVDYYV QPDEVARIEN AHLNNVVRG
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