Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3773 |
Symbol | |
ID | 5081053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4379002 |
End bp | 4380186 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500982 |
Product | elongation factor Tu |
Protein accession | YP_001185279 |
Protein GI | 146294855 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000180335 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAG CTAAATTTGA ACGTATTAAG CCCCATGTAA ACGTGGGCAC CATTGGTCAC GTTGACCATG GTAAAACCAC TCTGACTGCA GCTATCTCTC ACGTACTGGC TAAGACCTAC GGTGGCGAAG CTAAAGACTT CTCTCAAATC GATAACGCTC CAGAAGAGCG TGAGCGCGGT ATTACCATCA ATACCTCTCA CATCGAATAT GACACGCCAT CACGCCACTA CGCCCACGTA GACTGCCCAG GCCACGCTGA CTATGTTAAA AACATGATCA CTGGTGCTGC ACAGATGGAC GGCGCGATTC TGGTAGTCGC TTCAACAGAC GGTCCAATGC CACAGACTCG TGAGCACATC CTGCTTTCTC GTCAGGTTGG CGTACCATTC ATCATCGTAT TCATGAACAA ATGTGACATG GTAGATGACG AAGAGCTGTT AGAGCTAGTT GAGATGGAAG TGCGTGAACT GTTATCAGAA TACGATTTCC CAGGTGATGA CTTACCGGTA ATCCAAGGTT CAGCTCTGAA AGCGCTAGAA GGCGAGCCAG AGTGGGAAGC AAAAATCCTT GAATTAGCAG CGGCGCTGGA TTCTTACATT CCAGAACCAC AACGTGACAT CGATAAGCCG TTCCTACTGC CAATCGAAGA CGTATTCTCA ATTTCAGGCC GTGGTACAGT AGTAACAGGT CGTGTTGAGC GTGGTATTGT ACGCGTAGGC GACGAAGTTG AAATCGTTGG TGTACGTGCG ACAACTAAGA CAACGTGTAC TGGTGTAGAA ATGTTCCGTA AACTGCTTGA CGAAGGTCGT GCAGGTGAGA ACTGTGGTAT TTTGTTACGT GGTACTAAGC GTGATGACGT AGAACGTGGT CAAGTATTAG CGAAGCCAGG TTCAATCAAC CCACACACCA CTTTTGAATC AGAAGTTTAC GTACTGTCAA AAGAAGAAGG TGGCCGTCAC ACGCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTAACCGGT ACTATCGAAC TGCCAGAAGG CGTAGAGATG GTAATGCCAG GCGACAACAT CAAGATGGTA GTGACACTGA TTTGCCCAAT CGCGATGGAC GAAGGTTTAC GCTTCGCAAT CCGTGAAGGC GGTCGTACAG TGGGTGCAGG TGTAGTAGCT AAAATCATTG CTTAA
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Protein sequence | MAKAKFERIK PHVNVGTIGH VDHGKTTLTA AISHVLAKTY GGEAKDFSQI DNAPEERERG ITINTSHIEY DTPSRHYAHV DCPGHADYVK NMITGAAQMD GAILVVASTD GPMPQTREHI LLSRQVGVPF IIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALKALE GEPEWEAKIL ELAAALDSYI PEPQRDIDKP FLLPIEDVFS ISGRGTVVTG RVERGIVRVG DEVEIVGVRA TTKTTCTGVE MFRKLLDEGR AGENCGILLR GTKRDDVERG QVLAKPGSIN PHTTFESEVY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMV VTLICPIAMD EGLRFAIREG GRTVGAGVVA KIIA
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