Gene Sputcn32_3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3773 
Symbol 
ID5081053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4379002 
End bp4380186 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content48% 
IMG OID640500982 
Productelongation factor Tu 
Protein accessionYP_001185279 
Protein GI146294855 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000180335 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG CTAAATTTGA ACGTATTAAG CCCCATGTAA ACGTGGGCAC CATTGGTCAC 
GTTGACCATG GTAAAACCAC TCTGACTGCA GCTATCTCTC ACGTACTGGC TAAGACCTAC
GGTGGCGAAG CTAAAGACTT CTCTCAAATC GATAACGCTC CAGAAGAGCG TGAGCGCGGT
ATTACCATCA ATACCTCTCA CATCGAATAT GACACGCCAT CACGCCACTA CGCCCACGTA
GACTGCCCAG GCCACGCTGA CTATGTTAAA AACATGATCA CTGGTGCTGC ACAGATGGAC
GGCGCGATTC TGGTAGTCGC TTCAACAGAC GGTCCAATGC CACAGACTCG TGAGCACATC
CTGCTTTCTC GTCAGGTTGG CGTACCATTC ATCATCGTAT TCATGAACAA ATGTGACATG
GTAGATGACG AAGAGCTGTT AGAGCTAGTT GAGATGGAAG TGCGTGAACT GTTATCAGAA
TACGATTTCC CAGGTGATGA CTTACCGGTA ATCCAAGGTT CAGCTCTGAA AGCGCTAGAA
GGCGAGCCAG AGTGGGAAGC AAAAATCCTT GAATTAGCAG CGGCGCTGGA TTCTTACATT
CCAGAACCAC AACGTGACAT CGATAAGCCG TTCCTACTGC CAATCGAAGA CGTATTCTCA
ATTTCAGGCC GTGGTACAGT AGTAACAGGT CGTGTTGAGC GTGGTATTGT ACGCGTAGGC
GACGAAGTTG AAATCGTTGG TGTACGTGCG ACAACTAAGA CAACGTGTAC TGGTGTAGAA
ATGTTCCGTA AACTGCTTGA CGAAGGTCGT GCAGGTGAGA ACTGTGGTAT TTTGTTACGT
GGTACTAAGC GTGATGACGT AGAACGTGGT CAAGTATTAG CGAAGCCAGG TTCAATCAAC
CCACACACCA CTTTTGAATC AGAAGTTTAC GTACTGTCAA AAGAAGAAGG TGGCCGTCAC
ACGCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTAACCGGT
ACTATCGAAC TGCCAGAAGG CGTAGAGATG GTAATGCCAG GCGACAACAT CAAGATGGTA
GTGACACTGA TTTGCCCAAT CGCGATGGAC GAAGGTTTAC GCTTCGCAAT CCGTGAAGGC
GGTCGTACAG TGGGTGCAGG TGTAGTAGCT AAAATCATTG CTTAA
 
Protein sequence
MAKAKFERIK PHVNVGTIGH VDHGKTTLTA AISHVLAKTY GGEAKDFSQI DNAPEERERG 
ITINTSHIEY DTPSRHYAHV DCPGHADYVK NMITGAAQMD GAILVVASTD GPMPQTREHI
LLSRQVGVPF IIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALKALE
GEPEWEAKIL ELAAALDSYI PEPQRDIDKP FLLPIEDVFS ISGRGTVVTG RVERGIVRVG
DEVEIVGVRA TTKTTCTGVE MFRKLLDEGR AGENCGILLR GTKRDDVERG QVLAKPGSIN
PHTTFESEVY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMV
VTLICPIAMD EGLRFAIREG GRTVGAGVVA KIIA