| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3744 |
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| Symbol | rplF |
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| ID | 5079131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4354248 |
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| End bp | 4354781 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500953 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_001185250 |
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| Protein GI | 146294826 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000640948 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTCGTG TAGCAAAAGC ACCAGTATCT ATTCCAGCTG GCGTAGAGGT GACCTTAAAC
GAACAGACCC TGACCGTCAA AGGCGCGAAA GGTAGTCTGA CTCGAGTGAT CAACAATGCG
GTCAATGTTG TTATTGAAGA TGGCGTAGTT AAGTTTCTTC CTGTTGAAGG CGTTGTTAAC
GCTTGGGCAC AGGCTGGTAC TACTCGTGCA TTAGTAAACA ACATGGTTGT TGGTGTATCT
CAAGGTTTTG AGCGTAAACT GAAGTTAGTT GGTGTTGGTT ACCGTGCGAA ACTCGTCGGA
GCTGATATTG ACCTGACTCT AGGTTTCTCT CATCCGTTAG TACACAAACT GCCCGCAGGC
GTTACTGCAG AGTGCCCTAG CCAAACTGAT ATCGTCCTTC GTGGCGTTGA TAAACAGTTA
ATTGGTCAAG TCGCTGCTGA GATTCGCGGA TACCGTCCAC CAGAGCCGTA TAAAGGCAAA
GGTGTTCGCT ATGACGACGA AGAAGTACGC CGTAAAGAGG CTAAGAAGAA GTAG
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| Protein sequence | MSRVAKAPVS IPAGVEVTLN EQTLTVKGAK GSLTRVINNA VNVVIEDGVV KFLPVEGVVN
AWAQAGTTRA LVNNMVVGVS QGFERKLKLV GVGYRAKLVG ADIDLTLGFS HPLVHKLPAG
VTAECPSQTD IVLRGVDKQL IGQVAAEIRG YRPPEPYKGK GVRYDDEEVR RKEAKKK
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