| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3725 |
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| Symbol | |
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| ID | 5079112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4342897 |
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| End bp | 4344144 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500935 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001185232 |
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| Protein GI | 146294808 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.231024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAT TTTGGATTTT TATTGCGCTT GTTGTGTTAG TCAGCCTAAC GTTGATTTGG
ATCCCGCATT TCAGACAACA AAAGTTGTTA CGTACTGAAG AAGCTGGCGT TCGTAAACAA
ACGAACCTCG AGTTATTCAA TGAACGTCTT GCAACACTAG AAAAAGAACT GAGCGAAGAA
CTGCTCGATC AAACAGAATT TGATGCTCTT AAAAAAGAAT TAGAAATCAG CTTACTGCAA
GATATCAAAC AGGCAGGAGA TGATTCACTG GTTAATCAAA TTAAACCCAA AACCATACTC
TGGCCATCAA TAATGTCAGT GGGTTTACTT GCTATTTCAG GTTACCTGTA TCAGCACCTA
GGTGCTTTCG AAAATATTGG AACAGCCCAA CCCGCTAATC CACATGCTGG AATGGATACA
GCCCAAATCA TGGGGCAACG TATTCAGGCA ATTGAAGCAC AAGTACAAGC AGAACCTGAA
AATAGCCAAG CTTGGTTTAG CCTAGGCCAT GCATATATTT CTGCAAATCA ATTCGATAAG
GCAATTGCCG CTTTCGATAA AGTCATGGAA TTAGTCGGTA AACATGCGGA GTTATTAGGT
CCAAAAGCGA CAGCTATGTA CTACAAAGCT GGACAGCAGA TGACGCCACA AATCCAAGCG
ATCATTGATG AATCCTTAGC GATGGATCCA CAAGATCCTT CAACACTGCT ACTCGTTGGA
ATGAATTCTT TCTTTCTCGC TGACTACAAA AAAGCAATTA CCTCATGGCA AACCATTCTT
GATAGCGACC GTACTGATGT GGATCGCGCA GCGTTAATGA ATGCAATTGA AACTGCAAAC
CTACGCATGC AAGCAGAAAC CACAGGTATG CCTGATGATG ACGTGCATAA ACAAGCTGCA
GTGGGAAAAA AATCAGTCAG TATAGCGATT TCAATCTCTC CGGAACTTGC AGCTAAGGCG
AGTCCAGAAG ACACTATTTT TGTGTTTGCA CGTGCAACTG AGGGTCCAAA AGTCCCCTTA
GCAGCAACAA AAGTGAGCGC AAGCGCCTTA CCCGTTACTG TAACGTTAGA TGACAGCACT
GGCATGGGAG GAGATGCAAA ATTAAGTCAG GCGACTAGCG TTGAAGTGAT CGCCGTACTT
TCCAAGCATG GCAATATCAA ACCTCAAGCT GGTGATATTC AAGGTAAGAT CAGCAAAGTT
ATTGTAGGTG AAACAGCAAA CCTCGTACTT GATACCCAAG TACAATAA
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| Protein sequence | MTTFWIFIAL VVLVSLTLIW IPHFRQQKLL RTEEAGVRKQ TNLELFNERL ATLEKELSEE
LLDQTEFDAL KKELEISLLQ DIKQAGDDSL VNQIKPKTIL WPSIMSVGLL AISGYLYQHL
GAFENIGTAQ PANPHAGMDT AQIMGQRIQA IEAQVQAEPE NSQAWFSLGH AYISANQFDK
AIAAFDKVME LVGKHAELLG PKATAMYYKA GQQMTPQIQA IIDESLAMDP QDPSTLLLVG
MNSFFLADYK KAITSWQTIL DSDRTDVDRA ALMNAIETAN LRMQAETTGM PDDDVHKQAA
VGKKSVSIAI SISPELAAKA SPEDTIFVFA RATEGPKVPL AATKVSASAL PVTVTLDDST
GMGGDAKLSQ ATSVEVIAVL SKHGNIKPQA GDIQGKISKV IVGETANLVL DTQVQ
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