| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3723 |
|---|
| Symbol | |
|---|
| ID | 5079110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 4339955 |
|---|
| End bp | 4340509 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640500933 |
|---|
| Product | periplasmic protein thiol--disulphide oxidoreductase DsbE |
|---|
| Protein accession | YP_001185230 |
|---|
| Protein GI | 146294806 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000212107 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGT TAGTTCTATT TATCCCTCTG GTGCTATTTC TTGCCATGGG AGTATTTTTA
TATAAAGGGT TGTTTTTGAA TCCTCAAAAA TTGGATTCAG CACTAGAAGG AAAGCCTATT
CCGGCTTTCC AGCTAGAACG TCTAGAAACA CCTGATGAGC TGATTACCAA TGAACAGTTA
AAAGGGAAAG TAGCATTACT CAACGTATGG GCGACTTGGT GCCCATCTTG TAAATATGAA
CACCCTTTTT TAAATATGTT ATCGCGGAAA AATATTCTAC CCATATACGG TATCAACTAT
CGGGATGAGC GTGCGCCTGC AATCGCTGAG CTGAGACGCC AAGGTGACCC ATATACATTG
AATATCTTTG ATAAAGATGG ACGCTTGGGT CTAGACCTTG GCGTTTATGG CGCTCCAGAA
AGTTTTATTG TTGATCATAA CGGTATTATT CGCTTCCGCT ATGCAGGCCC TATTGATCAA
AATGTCTGGA GTGAAACACT ATTCCCAATG ATCCAGCAAT TACAGGCAGA AGCAGCAAAG
GATAATGTAT CGTGA
|
|---|
| Protein sequence | MKKLVLFIPL VLFLAMGVFL YKGLFLNPQK LDSALEGKPI PAFQLERLET PDELITNEQL
KGKVALLNVW ATWCPSCKYE HPFLNMLSRK NILPIYGINY RDERAPAIAE LRRQGDPYTL
NIFDKDGRLG LDLGVYGAPE SFIVDHNGII RFRYAGPIDQ NVWSETLFPM IQQLQAEAAK
DNVS
|
|---|
| |