| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3713 |
|---|
| Symbol | |
|---|
| ID | 5079097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 4322287 |
|---|
| End bp | 4323654 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640500920 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_001185220 |
|---|
| Protein GI | 146294796 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAT GGGGTGGAAG ATTTCAAGGC GAAACTAGCG CGCTATTTAA ATTATTCAAC
GATTCGTTGC CTGTGGATTA CCGTTTGTTT GAGCAAGATG TGGTCGGCTC TATTGCTTGG
GCGGATGCGA TTGCCAGCGT TGGTATTATC ACCGCAACTG AATGCAGTGA CTTAAAACAA
GCGCTTAATG AGCTGCTAGT GGAAGTACAG GGCGATCCGG CGATTATTCT TGCCTCGGGC
GCCGAAGATA TTCACAGCTT CGTGGAATCT GCGCTGATCG CCAAAGTCGG CGATCTTGGT
AAAAAACTGC ACACTGGCCG TAGCCGTAAC GATCAAGTTG CCACCGATTT AAAGCTTTGG
TGTCAATCCG AAGGCAAAGC ATTACTCGCA CGCCTTCAAG GCTTACATGC TGAATTACTG
GCCTTGGCTG AGCGTGAATT TGATGCGGTA ATGCCCGGTT ATACTCACTT GCAGCGCGCG
CAACCTGTGA CATTTGGCCA CTGGTGTTTG GCCTATGTGG AAATGACTGA GCGGGATATC
AGCCGTTTAG CCGATGCGTT AACTCGCGCG AATACTTGCC CATTAGGTTC GGGTGCCCTT
GCTGGCACAG CCTACAAAAT GGATCGACAT GCACTGGCTA CAGCGTTGAA TTTTGCCTCG
CCAACGCTGA ATAGCTTAGA TAGCGTATCA GACAGAGATC ACGTGGTAGA GCTTTGTTCA
ACCGCCTCAA TCAGCATGAT GCACTTAAGC CGTATGGCTG AAGATTTGAT TTTCTTTAAC
TCAGGTGAAG CGAACTTTAT TTCCTTGAGT GATGAAGTGA CCTCAGGTTC ATCCCTGATG
CCACAGAAGA AAAATCCAGA CGCATTAGAG CTTATCCGTG GTAAAACCGG CCGGGTTTAT
GGCAGCTTAG TGGGCATTCT CACTACGATG AAAGCGCTGC CTTTGGCGTA CAATAAAGAT
ATGCAGGAAG ATAAAGAAGG CCTGTTTGAT GTGGTCGATA GCTGGGCAAT TTGCCTCGAT
ATGGCGGTGT TAGTGTTATC TGGCTTGAAG GTTAATCGTC CTAATGCGCT GTTAGCCGCG
CAACAAGGTT ATGCGAACTC TACTGAATTG GCCGATTATC TAGTATCTAA AGGTATGCCT
TTTAGAGAGG CGCATCACGT AGTGGGTGAA GTCGTCGTAG CAGCGATAGC TAAGCAAATT
CCGCTCGAGG ATTTCTCCTT GGCCGAATTA AAAACTTTTG CCGCTATCAT TGAGGAGGAT
GTTTATCCCA ACCTGACTAT TGAAGCCTGT TTGGCGAAAC GCGATGTACT CGGCGGTACT
GCTTTGCCAC AAATTCAACA GGCTATTGCA GCCAAGAAAG CACGCTAA
|
|---|
| Protein sequence | MALWGGRFQG ETSALFKLFN DSLPVDYRLF EQDVVGSIAW ADAIASVGII TATECSDLKQ
ALNELLVEVQ GDPAIILASG AEDIHSFVES ALIAKVGDLG KKLHTGRSRN DQVATDLKLW
CQSEGKALLA RLQGLHAELL ALAEREFDAV MPGYTHLQRA QPVTFGHWCL AYVEMTERDI
SRLADALTRA NTCPLGSGAL AGTAYKMDRH ALATALNFAS PTLNSLDSVS DRDHVVELCS
TASISMMHLS RMAEDLIFFN SGEANFISLS DEVTSGSSLM PQKKNPDALE LIRGKTGRVY
GSLVGILTTM KALPLAYNKD MQEDKEGLFD VVDSWAICLD MAVLVLSGLK VNRPNALLAA
QQGYANSTEL ADYLVSKGMP FREAHHVVGE VVVAAIAKQI PLEDFSLAEL KTFAAIIEED
VYPNLTIEAC LAKRDVLGGT ALPQIQQAIA AKKAR
|
|---|
| |