| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3709 |
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| Symbol | |
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| ID | 5079093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4317223 |
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| End bp | 4317849 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640500916 |
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| Product | pilus assembly protein, PilO |
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| Protein accession | YP_001185216 |
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| Protein GI | 146294792 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00761204 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG ATCTTAGTCA GTTTAATGAC ATCGATTTTG AGAATATTGG TGGTTGGCCT
AATCAAGTAA AAACTTTTTT TGCAATATTA TTAGCGCTTT GTGTTTTTGC TGCGGGTTAT
TTTCTTGTGA TAGCAGATGC TGTTGATTTG TATAGCGCGG AGCAAAATAA AGAGGTGCAG
TTACGGGATG ACTTTAAAAA TAAATATCAA CTTGCGGCAA ATTTGAAACT CTATCGCGAA
CAGTTAGCTA TCATGGAAGT GCAATTTGCT GAATTGCTTA AAATGTTACC GTCTGAAAAT
GAAATGCCAG GTTTGCTCGA TGATCTGACT TTTGTCGCAA CGGATGCAGG ATTAAGAATT
AAGAGTTTAA ACTGGGAACC CGAAATTCAG CGTGATTTTT ATATTGAGTT TCCTATTAAA
ATGTCTGTTA CTGGGGATTA TCACCAGCTG GGCAATATGG TCAGTGGTGT CGCAAAATTA
CCACGAATTG TTAGTCTTCA CGATTTTACG ATTAAACGGG ATGACTTAGG TAATTTAGCG
ATGGATATTT TAGCAAAAAC CTATCGCTTT AAGGAAGGAG CTGAATTACC ACCCGAAAAG
ACATCGGATA ATAAGGGTAA AAAATGA
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| Protein sequence | MKLDLSQFND IDFENIGGWP NQVKTFFAIL LALCVFAAGY FLVIADAVDL YSAEQNKEVQ
LRDDFKNKYQ LAANLKLYRE QLAIMEVQFA ELLKMLPSEN EMPGLLDDLT FVATDAGLRI
KSLNWEPEIQ RDFYIEFPIK MSVTGDYHQL GNMVSGVAKL PRIVSLHDFT IKRDDLGNLA
MDILAKTYRF KEGAELPPEK TSDNKGKK
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