| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3680 |
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| Symbol | potE |
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| ID | 5079013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4288355 |
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| End bp | 4289674 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500886 |
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| Product | putrescine transporter |
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| Protein accession | YP_001185187 |
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| Protein GI | 146294763 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAT CAGAGAATAA AATTGGTGTT GTCCAATTAA CGATTATCAC CATAGTCAAT
ATGATGGGTT CAGGCATTAT TATGTTGCCA ACCCAATTAG CCCAAGTGGG AACCATTTCA
ATTTTATCTT GGCTCGTCAC GGCCGCGGGC TCTACGGCGC TGGCCTTTGC CTTTGCTAAG
TGCGGTATGT TCAGTAAAAA ATCCGGTGGT ATGGGCGGTT ATGCCGAGTA TGCCTTTGGT
CGTTCAGGTA ACTTTATGGC CAACTATACC TATGCGGTTT CACTATTAAT TGCCAATGTC
GCGATTGCTA TTTCGGCCGT AGGTTACGCC GCGGTATTGC TTGAGGTTAA CCTAAGTCCT
ATCGCCATTT GCCTTGCGAC GATTGGCGTG CTTTGGTTAG CGACAATTGC AAACTTTGGT
GGTGCCCGCA TTACAGGCCG CGTGAGTAGC GTAACAGTTT GGGGAATTAT CATACCTGTG
ATTGGTGTGT CTTTAATTGG CTGGTACTGG TTTGATATTG ACCTCTATAA AGGCGCTTGG
AACCCGCATG ATATGCCATT CTTTAAAGCA CTAGGCGGCT CTATCGCAAT GACATTATGG
GCTTTCCTTG GTTTAGAATC AGCCTGCGCA AACTCTGAAG CTGTTGATAA TCCAGAAAAA
AATGTACCCA TCGCCGTTAT GGGAGGGACA TTAGGTGCGG CGATAATCTA CATCGTTTCC
ACTAACGTCA TTGCCGGTAT TGTACCAAAC GCTGAGCTTG CTATGTCGAA TGCGCCATTC
GGTTTAGCTT TCGCGCAAAT GTTTAATCCT GTGGTCGGAA AAATCGTGAT GGCCTGTGCC
ATTATCTCTT GTACTGGATC GCTATTAGGC TGGCAGTTCA CTATTGCCCA AGTGTTTAAA
GCCTCAGCCG ATGAAGGATT CTTTCCAAAA ATATTCTCTA AGGTCAGCAA AGCCGATGCG
CCTATTTGGG GTATGACAAT TATCGTTTCA ATTCAAACTA TGTTGTCATT AATGACCATT
AGTCCCTCAC TGAGCAAACA GTTTGAAGCC CTTGTCAATC TTGCTGTCGT CACCAATATT
GTGCCCTACA TTTTATCGAT GGCCGCCCTA GGTATTATGC AAAGACAGCT TAAAGTGCCT
GCGAATAAGG CCCGTGTTGC CAACGTCATT GCCGTGATTG GTGCCCTATA TAGCTTCTAC
GCCCTTTATA GCTCCGGTGA AACAGCAGTA ATGCTTGGTG CAATAGCGAC CTTCTTCGGT
TGGACTATCT ACGGTGTTAT TTCAAATAAA ACCCCAGTCG CTGAGGCGCG CCCAGTGTGA
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| Protein sequence | MSKSENKIGV VQLTIITIVN MMGSGIIMLP TQLAQVGTIS ILSWLVTAAG STALAFAFAK
CGMFSKKSGG MGGYAEYAFG RSGNFMANYT YAVSLLIANV AIAISAVGYA AVLLEVNLSP
IAICLATIGV LWLATIANFG GARITGRVSS VTVWGIIIPV IGVSLIGWYW FDIDLYKGAW
NPHDMPFFKA LGGSIAMTLW AFLGLESACA NSEAVDNPEK NVPIAVMGGT LGAAIIYIVS
TNVIAGIVPN AELAMSNAPF GLAFAQMFNP VVGKIVMACA IISCTGSLLG WQFTIAQVFK
ASADEGFFPK IFSKVSKADA PIWGMTIIVS IQTMLSLMTI SPSLSKQFEA LVNLAVVTNI
VPYILSMAAL GIMQRQLKVP ANKARVANVI AVIGALYSFY ALYSSGETAV MLGAIATFFG
WTIYGVISNK TPVAEARPV
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