Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3659 |
Symbol | |
ID | 5078992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4265363 |
End bp | 4266817 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500865 |
Product | hypothetical protein |
Protein accession | YP_001185166 |
Protein GI | 146294742 |
COG category | [S] Function unknown |
COG ID | [COG0397] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.269088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTTA AACAGGATTT TTTTACTCAA TTACCTGAGT TTTATTCTCA AGTATATCCG CAGGGACTCA GTCATCCACA GTGGTTAGCA TGGAGTCATG ATGCTGCCCA ACTGATAGGC TTAACTCAAC CTACGGACGA GTTACTGTTG GGGTTATCGG GTAATGCCGC CATCGATGGC GCCACTTATT ATGCTCAAGT GTATAGCGGC CACCAATTTG GCGGGTATAC ACCGCGTTTA GGCGATGGCC GCTCAATTAT TTTAGGTGAA GCGATAGGGC CGAATGGCGC ATGGGATGTG GCACTTAAGG GCGGTGGCCC AACCCCATAC TCACGTCATG GTGATGGCCG CGCCGTGATG CGCTCAGCCG TGAGGGAGTT CTTAGTCTCG GAAGCCTTAT ATCATTTACA TGTACCTACG ACTCGCGCCT TAGCCGTAAT CGGTTCGGAT ATGCCTGTCT GGCGTGAGAG CCAAGAAACT GCGGCGATTA CCGTGCGTTT AGCTCGTAGC CATATTCGTT TCGGCCATTT CGAATTTTTC TGCCACAGTG AACGCGGCCG TGCCGATAAG CTGCTCCAAT TACTCAACTT CACTATTACT CAGCATTATC CTCATTTGAG TTGCGATCCA TCGGGTTATA AAGCGTGGTT TTTACAGGTC GTCCAAGATA CTGCTAAGAT GATTGCCCAT TGGCAGGCGG TGGGTTTTGC CCATGGGGTG ATGAACACCG ACAATATGTC GATTTTAGGG GATAGTTTTG ATTTCGGCCC CTTTGCCTTT CTTGATACTT TTCAAGAAGA TTTTATTTGT AACCATTCCG ATCCAGAAGG TCGTTATGCC TTTGGTCAGC AACCTGGGGT CGGTTTATGG AATTTGCAGC GTTTAGCGCA GGCGCTCACG CCTGTTATCC CATCCGATGA TTTAATTGCC ATTCTTAATC AATACCAAGA GGCGCTAGTA CAGACCTATT TGCTGTTAAT GCGCGCCAAA TTGGGGCTGA CAACATTGGA TAAATCAACG GCCGAGCAGG ATAAGCAAGA TCTTGAACTT ATAGGTCAAT TCACTGTGTT GATGGAAAAA AACCAACTGG ATTACGCTCA AACATGGCGT CAATTTGGTC AGTTAGATCC AAGGAGTCAA CATAGCTCTC TACGGGATGA TTTTATCGAT ACTCATCAGT TCGACACTTG GTATAAAGCT TATCAGCTTA GATTAGGGGA CGTTACGGAT ATTGCGGCTT GGCAAACTGA GCGTAATAGT GTCAATCCTA AATATATTTT GCGCAATTAT TTAGCTCAAG AGGCGATAAT TGCCGTAGAA GAAGGTAACC TTGCGCCACT GCAGCGTTTG CAACAAGTGT TGAGTCAGCC ATTTGCAGAA CAAGTTGAAC ATGATGAGTT AGCTAAGCGT CCACCCGATT GGGGCCAAGG GTTAATTATG TCATGTAGTA GTTGA
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Protein sequence | MQFKQDFFTQ LPEFYSQVYP QGLSHPQWLA WSHDAAQLIG LTQPTDELLL GLSGNAAIDG ATYYAQVYSG HQFGGYTPRL GDGRSIILGE AIGPNGAWDV ALKGGGPTPY SRHGDGRAVM RSAVREFLVS EALYHLHVPT TRALAVIGSD MPVWRESQET AAITVRLARS HIRFGHFEFF CHSERGRADK LLQLLNFTIT QHYPHLSCDP SGYKAWFLQV VQDTAKMIAH WQAVGFAHGV MNTDNMSILG DSFDFGPFAF LDTFQEDFIC NHSDPEGRYA FGQQPGVGLW NLQRLAQALT PVIPSDDLIA ILNQYQEALV QTYLLLMRAK LGLTTLDKST AEQDKQDLEL IGQFTVLMEK NQLDYAQTWR QFGQLDPRSQ HSSLRDDFID THQFDTWYKA YQLRLGDVTD IAAWQTERNS VNPKYILRNY LAQEAIIAVE EGNLAPLQRL QQVLSQPFAE QVEHDELAKR PPDWGQGLIM SCSS
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