| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3565 |
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| Symbol | |
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| ID | 5078801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4142520 |
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| End bp | 4143743 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640500768 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001185073 |
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| Protein GI | 146294649 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCAT TTGAATATAA AGCACTGGAT GCCAAGGGTA AGCAGCTTAA AGGCGTGATA
GAGGCCGATA CCGCCAGACA TGCCCGTAGC CAACTGCGGG AACAGCGTAT GATGCCGCTG
GAAATTCTTC CCGTTACCGA AAAAGAAGCC AAAGCCAAAA GCAGTGGGTT TTCTGTTTTC
AAACGTGGGA TTTCAGTCGC TGAACTTGCC CTTATTACTC GCCAAATCGC GACGTTAGTG
GCGGCGGGGT TACCTATTGA AGAATCCCTT AAAGCCGTCG GTCAACAATG TGAGAAGGAT
CGTCTCGCGA GTATGATTAT GGCGGTGCGT TCACGGGTCG TCGAAGGTTA TAGCTTTGCC
GACTCCCTTG CTGAGTTTCC GCATATTTTC GATGACTTAT ACCGCGCTAT GGTGGCCTCG
GGGGAAAAGT CAGGGCACCT AGAAGTGGTC TTAAATCGTC TTGCCGATTA CACCGAGCGC
CGCCAACAGC TTAAGTCAAA ACTGCAACAG GCAATGATTT ATCCGATAGT GCTGACTGTG
GTCGCAATTG GTGTGATTTC AGTATTGCTC GCGGCTGTGG TACCTAAGGT TGTTGGTCAA
TTTGAACATA TGGGTGCAGA GTTACCCGCT ACCACTCGTT TTTTGATCTC GGCGTCTGAT
TTTGTCCAAA ACTACGGCCT CTTTGTGGTG TTGGCGATAG TATTGTTGGC AGTCGTGTTT
CAACGGATGC TTAAGTCGCC AGCATTTAGA ATGAAGTACG ATAGTTTTTT ACTGAAAATG
CCCGTGATTG GTCGTGTCAG TAAAGGCCTT AATACGGCGC GTTTTGCGCG TACCTTAAGT
ATTCTTTCTG CCAGTTCTGT CCCCTTGCTT GATGGTATGC GTATTGCGAG CGAAGTACTG
CAAAATATGC GAGTACGTGC CGCCGTTGAT GATGCAACAG CACGTGTGCG AGAGGGAACC
AGCCTTGGTG CTGCGTTGAC TAACACTAAG CTGTTTCCGG CAATGATGTT ATATATGATT
GCCTCGGGCG AGAAAAGTGG TCAGCTCGAA CAGATGCTAG AACGGGCTGC GGATAACCAA
GATAGGGAGT TTGAAGGTAA CGTCAATATT GCCCTTGGCG TATTTGAACC TATGTTGGTG
GTGAGTATGG CGGGTATTGT GCTCTTTATC GTTATGGCGA TTTTGCAGCC GATATTAGCA
TTGAACAACT TGATTAGTAG CTGA
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| Protein sequence | MPAFEYKALD AKGKQLKGVI EADTARHARS QLREQRMMPL EILPVTEKEA KAKSSGFSVF
KRGISVAELA LITRQIATLV AAGLPIEESL KAVGQQCEKD RLASMIMAVR SRVVEGYSFA
DSLAEFPHIF DDLYRAMVAS GEKSGHLEVV LNRLADYTER RQQLKSKLQQ AMIYPIVLTV
VAIGVISVLL AAVVPKVVGQ FEHMGAELPA TTRFLISASD FVQNYGLFVV LAIVLLAVVF
QRMLKSPAFR MKYDSFLLKM PVIGRVSKGL NTARFARTLS ILSASSVPLL DGMRIASEVL
QNMRVRAAVD DATARVREGT SLGAALTNTK LFPAMMLYMI ASGEKSGQLE QMLERAADNQ
DREFEGNVNI ALGVFEPMLV VSMAGIVLFI VMAILQPILA LNNLISS
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