Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3551 |
Symbol | |
ID | 5078744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4131903 |
End bp | 4132502 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500754 |
Product | phage tail collar domain-containing protein |
Protein accession | YP_001185059 |
Protein GI | 146294635 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATC CATTTATTGG TCAAATTTCT ATGTTTGCTG GCAACTTTGC ACCTCGCGGC TGGGCTTTTT GTAATGGGCA ATTATTGTCT ATCTCGCAAA ACTCTGCACT TTTTGCAATT CTAGGCACCA CCTATGGTGG CAATGGCCAA ACGACTTTTG CACTGCCTAA CCTACAAGGG CGTGTGCCTG TGCATCAAGG CCAAAGCCCT GGCACCAGTC AATATACCCT GGGACAAACG GGTGGAACTG AAAATGTGAC CTTGACAGCC AATGAATTAC CCGCGCACGT TCATTCCGTA GCACTAAATG GAACAGGAAA TACGAGCGTT GCATTGGGAG CTTCCTCCGC GAATGGTAAT ACCGCTACTC CTGGGCCAAC CACGGTGCCC GCCAAAGTGG TGAGTGGCTT AGCTGCTCTT AATGCGTTTA GCACTACTGC ACCAGACACC ACACTATCGC CTGTGACTGC CACCACAACT GTTAACGTAA ATGGAAATAC AGGTATTTCT GGTAACAATA TGCCTGTTTC TGTCGTTCAA CCTTATCAAG TTGTTAATTT TATTATTGCT CTTGAAGGCA TTTTCCCTTC ACGTAATTGA
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Protein sequence | MSDPFIGQIS MFAGNFAPRG WAFCNGQLLS ISQNSALFAI LGTTYGGNGQ TTFALPNLQG RVPVHQGQSP GTSQYTLGQT GGTENVTLTA NELPAHVHSV ALNGTGNTSV ALGASSANGN TATPGPTTVP AKVVSGLAAL NAFSTTAPDT TLSPVTATTT VNVNGNTGIS GNNMPVSVVQ PYQVVNFIIA LEGIFPSRN
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