Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3485 |
Symbol | |
ID | 5080520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 4048306 |
End bp | 4050387 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500684 |
Product | flagellar biosynthesis protein FlhA |
Protein accession | YP_001184994 |
Protein GI | 146294570 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTGGC TACGACGCAC CTTTTCAGGA AATTACAGCT ATATTGGTAT TCCAGTTATG CTGCTCGCTA TTCTCGCTAT GGTGATTCTG CCGCTACCGG CATGGCTACT AGACATTTTA TTTACGTTTA ACATCGTTCT TGCCGTGATG GTGCTACTGG TGAGTGTGTC TATCAGGCGG CCGCTCGAGT TTTCCGTATT TCCCACCTTG TTACTACTTG CCACCTTAAT GCGTTTAACC TTAAACGTCG CATCAACGCG CGTGGTGCTG ATTGAGGGCC ACGAAGGTGG CGATTCGGCG GGTAAGGTCA TTCAAGCCTT CGGTGAAGTC GTTATTGGTG GAAACTATGT TGTCGGTGCC GTTATCTTCC TCATTTTAAT GATAATTAAC TTTGTTGTTA TCACTAAAGG TGGCGAACGG ATCTCCGAGG TCTCGGCACG GTTTACGTTA GATGCCTTAC CCGGTAAACA GATGGCTATC GATGCCGATC TCAATGCTGG CACGCTAACC CACGAACAAG CACGCGTACG TCGTCAAGAT GTTGCTAGGG AAGCCGACTT TTACGGTTCC ATGGATGGGG CATCAAAATT TGTTAGAGGT GATGCCATTG CGGGGCTATT AATCTTAGCC ATCAACATTA TTGGCGGGAT CTGCATAGGT ATCTTTATGC ATGATCTCAG CGCCGCTGAA GCCTTTAAAA CCTATGCCTT ATTAACCATT GGTGACGGCC TTGTCGCACA AATTCCATCG TTACTGCTCG CCACCGCTGC CGCCATTATT GTCACACGTG TTTCCGATGC GGAAGAAATG CCGACTCAGT TAAGTCGACA ATTATTAGCC AATCCAAAAA CCTTAGCTAC CGCGGCCATT GTGATGGGAA TTCTTGGGAT AACTCCGGGA ATGCCAGCAT TAGTCTTCCT ATCTTTTGCG ATATTGCTTG GTTTCGCCGC ATGGAAGCAA AACCAAAATA GGGCTGCTTT TACCGAAGAA AAAACCGAAG AACTGATAGA AACGAGCCTA ACAGAACCTT CAGCGCCTAG CTGGGAATCA CTTCCCTTTA TCGATATTAT CGAAGTGCGA TTAGGCTATA GACTGGTCCA TTTAGTTGAA AAAACGAAAG GTGCAGAGTT ACAGAAGCGC CTTACAGGGA TCAGACGCAC GCTATCAGAA CAAATCGGAT TTTTACTCTC AGAAGTCAGA GTGCGTGATA ACTTAGCCTT AGCGCCACAT GCGTATCAAA TCAACTTTAT GGGAACACAG GTGGCCATTG CAGAACTCGA ACCCGATTTG CTGTTAGCCA TAAAAAGTGG CCCCGTCTAT GGCAAGATTG ATGGGATCTT AACCAAAGAA CCCGCCTATC AAATGGATGC CATCTGGATC CAACCAGATT TAAAGGCTAA AGCACTCAAC TTGGGTTACT CAGTGGTCGA TAACGCAACC ATTATTGCCA CTCATGTGAG TAAATTATTG CGTGAGTCAC TGCCTGAGTT ATTGCAACAT GATGATATTA TGCAATTAAC TGACAGACTC AGTAAGCAAG CACCAAAACT CGCTGAATCA CTCAGTACGA GCTTAACCCC CATTCAGTTA CTCAAAGTTT TTCGCTTGTT ACTCAAAGAA CAAGTGCCGC TTAAAGATAT ACGCACCATA GCGACAACCT TGCTGGAATG TAGCGAACAA ACTAAAGATC CGGTATTACT TGCAGCGGAT GTGCGCTGCG CCTTACGCAA TAGCATATTG CACCAAATTG CTGGCAGCAG TGCGCAGTTA AATGTACTCA CACTTACCGC TGAGTTAGAA CAAACATTAA TGACCGCATT AAATCAATCA CAACAGCAAG GGCGTGTATC GCTTGATAGC TTCCCAATAG AACCGAACCT ACTTGCACAG CTGCAACAAA AAATGCCGCA ATTACTCGCT GATACAAAAG AGAAAGGCTA CAACCCCATT CTACTTGTAT CACCACAACT TAGGCCCTTC CTCGCCCGTT ACGCATTAGC ATTCGCAAGA GGGTTGCATG TTTTATCCTA CAATGAAGTC CCTGAAACAA AAGAGCTGAT GATTGCAGGA CAACTTGGGT AA
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Protein sequence | MNWLRRTFSG NYSYIGIPVM LLAILAMVIL PLPAWLLDIL FTFNIVLAVM VLLVSVSIRR PLEFSVFPTL LLLATLMRLT LNVASTRVVL IEGHEGGDSA GKVIQAFGEV VIGGNYVVGA VIFLILMIIN FVVITKGGER ISEVSARFTL DALPGKQMAI DADLNAGTLT HEQARVRRQD VAREADFYGS MDGASKFVRG DAIAGLLILA INIIGGICIG IFMHDLSAAE AFKTYALLTI GDGLVAQIPS LLLATAAAII VTRVSDAEEM PTQLSRQLLA NPKTLATAAI VMGILGITPG MPALVFLSFA ILLGFAAWKQ NQNRAAFTEE KTEELIETSL TEPSAPSWES LPFIDIIEVR LGYRLVHLVE KTKGAELQKR LTGIRRTLSE QIGFLLSEVR VRDNLALAPH AYQINFMGTQ VAIAELEPDL LLAIKSGPVY GKIDGILTKE PAYQMDAIWI QPDLKAKALN LGYSVVDNAT IIATHVSKLL RESLPELLQH DDIMQLTDRL SKQAPKLAES LSTSLTPIQL LKVFRLLLKE QVPLKDIRTI ATTLLECSEQ TKDPVLLAAD VRCALRNSIL HQIAGSSAQL NVLTLTAELE QTLMTALNQS QQQGRVSLDS FPIEPNLLAQ LQQKMPQLLA DTKEKGYNPI LLVSPQLRPF LARYALAFAR GLHVLSYNEV PETKELMIAG QLG
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