| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3483 |
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| Symbol | |
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| ID | 5080518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 4046384 |
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| End bp | 4047163 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500682 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_001184992 |
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| Protein GI | 146294568 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTCAC TGACCTCAAC AGAAATCAGT ATGCTCATCG GCGGCTTTTG GTGGCCATTT
TGCCGGATCA TGGGTGCTTT TATGATAATG CCACTCTTGG GTAATGCTTA TGTACCCGTG
ATGGTAAGAA TTTTTCTTGC GCTCAGTATC GCTGCATTGC TCGCACCTAT GCTCCCACCC
GTTCCACCTG TCGACGCAAT CTCACTCGCG TCACTTTTTT TAGCCATTGA ACAGCTACTC
ATTGGGTTTA TGCTCGCATT ATTTTTAACG CTGCTAATCC ATGTAATGAC CATGCTTGGC
AATATTATGT CCATGCAGAT GGGACTCGCC ATGGCAGTTA TGAACGATCC TGCCAATGGT
GACTCAAGCC CGATCATCAG CGAATGGTTT CAAATTTTTG GCACTTTGAT TTTTCTTGCA
CTCAATGGCC ACTTAGTTGC CATCAATATC ATTGTGGATA GTTTCCGTTT ATGGCCGATT
GGTCATGGCA TTTTTGAATT ACCACTCATG GGGTTAGTGA GCCGATTGGC TTGGCTGTTT
GCGGCATCAC TTATGCTCGC CATACCAGCA GTACTTGCCA TGCTAATGGT CAATATTACT
TTCGGAGTGC TAAGTCGCTC TGCGCCCTCA TTAAATATCT TCTCACTCGG ATTTCCCATG
ACGATGTTAA TGGGGTTGCT CTGTGTTTTT CTGTCACTGA GTGGCATACC TAGTCGTTAC
AGCGATCTCT GTTTAGATGC CTTGACCGCC ATGTATCAAT TTATAGGTGG GATCACATGA
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| Protein sequence | MLSLTSTEIS MLIGGFWWPF CRIMGAFMIM PLLGNAYVPV MVRIFLALSI AALLAPMLPP
VPPVDAISLA SLFLAIEQLL IGFMLALFLT LLIHVMTMLG NIMSMQMGLA MAVMNDPANG
DSSPIISEWF QIFGTLIFLA LNGHLVAINI IVDSFRLWPI GHGIFELPLM GLVSRLAWLF
AASLMLAIPA VLAMLMVNIT FGVLSRSAPS LNIFSLGFPM TMLMGLLCVF LSLSGIPSRY
SDLCLDALTA MYQFIGGIT
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