Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3477 |
Symbol | |
ID | 5080512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 4041393 |
End bp | 4041731 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500676 |
Product | flagellar hook-basal body complex subunit FliE |
Protein accession | YP_001184986 |
Protein GI | 146294562 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1677] Flagellar hook-basal body protein |
TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCTG GAGCGATAGT TAGCTCGAAT ATGCTAATGG ACACCTTAAG TATTCATCGG GAAGTGGCTA AAGGAGCGAT CAATATCTCC CCTAACCCCG CCGATAATGG TCAGGCTTAT GGCTCATTTA CGGACTTGAT AAAGAGTAAG GTGGCTGCCG TTAACCAAGA TCAGAATCAA TCCTCTATGG CGATGACTGC GGTTGATAGT GGAAAGAGTG ATGATCTTGT CGGTGCTATG GTGGCTTCGC AAAAAGCCAG TTTGTCCTTT GCGACTATGC TTCAAATTCG TAATCGTCTT GTGCAAGCAT TTGACGATGT AATGAAGATG CCTATTTAA
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Protein sequence | MSSGAIVSSN MLMDTLSIHR EVAKGAINIS PNPADNGQAY GSFTDLIKSK VAAVNQDQNQ SSMAMTAVDS GKSDDLVGAM VASQKASLSF ATMLQIRNRL VQAFDDVMKM PI
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