Gene Sputcn32_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3477 
Symbol 
ID5080512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp4041393 
End bp4041731 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content44% 
IMG OID640500676 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001184986 
Protein GI146294562 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTG GAGCGATAGT TAGCTCGAAT ATGCTAATGG ACACCTTAAG TATTCATCGG 
GAAGTGGCTA AAGGAGCGAT CAATATCTCC CCTAACCCCG CCGATAATGG TCAGGCTTAT
GGCTCATTTA CGGACTTGAT AAAGAGTAAG GTGGCTGCCG TTAACCAAGA TCAGAATCAA
TCCTCTATGG CGATGACTGC GGTTGATAGT GGAAAGAGTG ATGATCTTGT CGGTGCTATG
GTGGCTTCGC AAAAAGCCAG TTTGTCCTTT GCGACTATGC TTCAAATTCG TAATCGTCTT
GTGCAAGCAT TTGACGATGT AATGAAGATG CCTATTTAA
 
Protein sequence
MSSGAIVSSN MLMDTLSIHR EVAKGAINIS PNPADNGQAY GSFTDLIKSK VAAVNQDQNQ 
SSMAMTAVDS GKSDDLVGAM VASQKASLSF ATMLQIRNRL VQAFDDVMKM PI