| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3423 |
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| Symbol | |
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| ID | 5079814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3992982 |
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| End bp | 3994691 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640500622 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_001184932 |
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| Protein GI | 146294508 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACCA CTGGTCTTCA TTTAGGTTTA TCCACCCTAT TTATCCGTAA GGGTCTGCTA
AATGAAGAGC AGATGGCAGG GGCTATTGCA AAATCCCGTC ATAATAAACA AGGGTTAGTG
GCGACCTTAG TACAAGGCAA GTTAGTCTCA TCCCGCACCA TTGCCGAGCT TTGCTATGAA
GAATATGGCA CACCCTTACT GGATTTAGCG GAATTTGATA TACGAGCCAT TCCCGAAGAT
TTTTTAAATA AAAAACTGAT TGAAAAACAC CGCTGTTTAC CGCTATTTAA GCGCGGAAAT
CGCCTCTATA TCGCCACCTC CGATCCCACC AATATTGCCG CCCTTGAAGA TTTTCAATTT
AGCGCAGGCC TGCATGCCGA AGCGATTTTG GTTGAAGAAG ATAAACTCGC TAAAGCCCTT
GAAAAAATCC TTGAAGAAGA TATTACCAGC CTCGATTTAG GCGGCATGGA TGAAGCGGCG
CTGGCGGGGA TAGAAATTAC CGATACCGAT AGACGCAATG AAGAACCAAC AGGTGACAGC
AGTGACGATG CGCCCATTGT TATTTATATC AATAAAATTT TAACCGATGC GATTCGTAAG
GGTGCCTCCG ACTTACACTT TGAACCCTAC GAAAAACGCT ATCGCATCCG TTTTCGGATT
GACGGTATTT TGCATGAGGT ATCAGAGCCG CCCATTAGCC TTGCGGGTCG TTTATCCGCC
CGTTTAAAGG TGATGTCAAA ACTGGATATT GCCGAGCGGC GCGTACCACA GGATGGCCGA
ATTAAAATGA AGCTCTCCCG CACTAAGTCT ATCGATTTTC GGGTTAGCAC CTTGCCTACC
CTGTGGGGCG AAAAAATTGT AATGCGGATC TTGGACTCCT CCTCCGCACA ACTAGGTATC
GAAAAACTCG GCTACGAGCC CGATCAAGAA AAGTTATACC TTGAAATGCT CGCTAAACCC
CAAGGGATGA TTTTAGTCAC AGGACCAACT GGCTCGGGTA AAACCGTTTC CCTCTACACG
GGGTTAAATA TCCTCAATAC CGCCGAGCGC AATATTTCGA CCGCTGAAGA TCCGGTAGAA
ATTAACCTTG AGGGGGTCAA CCAAGTTCAT ATTAACCTAA AAGCCGGGCT GACATTTGCC
TCAGCGCTAC GCTCTTTTTT GCGCCAAGAC CCCGACGTGG TGATGGTGGG TGAGATACGC
GATCTTGAAA CCGCCGAAAT TGCCATTAAA GCAGCACAAA CGGGACATTT AGTGTTATCG
ACCCTACACA CTAACTCGGC CGCCGAAACC CTAACCCGTT TAATCAATAT GGGTGTACCT
GGATACAATA TCGCCAGCTC GGTTAACCTT ATTATTGCCC AGCGCCTTGC CCGCAGACTT
TGCCCAGAAT GCAAACAAGC AGAGGTGATC CCCGAACATG AACTCTTACG TTTAGGTTTT
TCTCCTGCAC AAATTACCCA AGGGTTTACT ACCTTTAAAC CAGTGGGGTG TGAACATTGC
TCTGGTGGTT ATAAGGGGCG AGTAGGGATT TATGAAGTGA TGAAAATGTC CGATGAAATT
GCCCGTACCA TTATGGAAGG CGGCAACTCG TTGCAAATTG CTTCCCAAGC CAAAGCACAA
GGTATGCGCG ATTTACGTCA ATCGGGTTTA TTAAAAGTAT TACAGGGCGT CACCAGTATT
GCCGAAGTTA ATCGGGTGAC GAGTTTTTAA
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| Protein sequence | MPTTGLHLGL STLFIRKGLL NEEQMAGAIA KSRHNKQGLV ATLVQGKLVS SRTIAELCYE
EYGTPLLDLA EFDIRAIPED FLNKKLIEKH RCLPLFKRGN RLYIATSDPT NIAALEDFQF
SAGLHAEAIL VEEDKLAKAL EKILEEDITS LDLGGMDEAA LAGIEITDTD RRNEEPTGDS
SDDAPIVIYI NKILTDAIRK GASDLHFEPY EKRYRIRFRI DGILHEVSEP PISLAGRLSA
RLKVMSKLDI AERRVPQDGR IKMKLSRTKS IDFRVSTLPT LWGEKIVMRI LDSSSAQLGI
EKLGYEPDQE KLYLEMLAKP QGMILVTGPT GSGKTVSLYT GLNILNTAER NISTAEDPVE
INLEGVNQVH INLKAGLTFA SALRSFLRQD PDVVMVGEIR DLETAEIAIK AAQTGHLVLS
TLHTNSAAET LTRLINMGVP GYNIASSVNL IIAQRLARRL CPECKQAEVI PEHELLRLGF
SPAQITQGFT TFKPVGCEHC SGGYKGRVGI YEVMKMSDEI ARTIMEGGNS LQIASQAKAQ
GMRDLRQSGL LKVLQGVTSI AEVNRVTSF
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