Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3392 |
Symbol | |
ID | 5078014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3948848 |
End bp | 3949384 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640500592 |
Product | thioredoxin |
Protein accession | YP_001184902 |
Protein GI | 146294478 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATCCT TCATCACAAG TACACGGTTG GTGATTACAT CAACACCCCC TTTAAATATC CGCCCATTAG CCCAATATAT GAAACATACA GACGTTTTAT TTTGGAGCTT TGCCATGATT ATTGCTTGCC CCCATTGCGA TACGTTAAAC CGCGTTCCCA ATGAGCGCTT AAACCAGCAT CCGACTTGCG GTAAATGTAA GCTCAGTGTC TTTACAGCAG CACCAATTGA ACTCACTAGC GCAAACTTTA CCAATCATGC CACTAAATCT GAACTTTCCC TTGTTGTCGA TTTTTGGGCA AGCTGGTGTG GGCCCTGTAA AAGTTTTGCT CCCATATTTT CTGAGGCAGC TAAAACGTGG GAACCTCAAT TTCGCTTCGG AAAAATTAAT ACTGAACAGC AACAATCCCT CGCGGCTCAG TTTAATATTC GCTCTATTCC AACCTTAATG ATTTTCAAGC AGGGGCATAT ACTCGCCCAA CAAGCAGGGG CTTTGCCAAA ATCGGCTTTC GATCAATGGT TAACAAGCTA TCGCTAA
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Protein sequence | MPSFITSTRL VITSTPPLNI RPLAQYMKHT DVLFWSFAMI IACPHCDTLN RVPNERLNQH PTCGKCKLSV FTAAPIELTS ANFTNHATKS ELSLVVDFWA SWCGPCKSFA PIFSEAAKTW EPQFRFGKIN TEQQQSLAAQ FNIRSIPTLM IFKQGHILAQ QAGALPKSAF DQWLTSYR
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