Gene Sputcn32_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_3358 
Symbol 
ID5078133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3908609 
End bp3909643 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content45% 
IMG OID640500559 
ProductABC transporter related 
Protein accessionYP_001184869 
Protein GI146294445 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.348903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATC AGACTTTGAC CTGCTCGTCG AATGCAAATG TTGTTAAAGC GATAAATGTC 
AGTAAAAGCT ATGGCAAGTT TAAGGCGCTA GATGAGGTGA GTTTTGATGT GTTAGCGGGG 
CAAATGATTG CGCTTCTTGG CCACAATGGC GCGGGTAAAT CTACGCTATT GAAATTGATT 
TTAGGGTTAG TGACCCCGTC AAAGGGGCAG ATCCAAGTGC AAGGGCAAGA TATGAGGTCG 
ATGAATCTAA GGCAGCGTTT ATCAATAGGT TATTTACCTG AAAATGTGAG TTTTTATGAC 
AATATGACCG CCAATGAGCT ACTGCGATAT TTCGCTAAGC TTAAGGGCGT TGCCTTGCAT 
AGAGTACATG AATTACTTGC TGAATTTGGT TTAGAGGCCG CTAAAGATAA GCGTTTGAGT 
ACTTTTTCCA AGGGGATGCG GCAACGTCTT GGGCTCGCAC AGGCGATATT GGCTGAGCCT 
AAAGTATTGC TGTTAGATGA ACCGACAGTC GGCTTAGATC CTCTGGCATC GGCGTTTCTT 
TATCAAAAAA TGGCGCAATT AAAGTCGCAG GGCTGTGCGA TTATTATCAG TACCCATGAG 
CTAGGTTTAG TACAGGAAAA TATGGATCGC GCCTTGATCT TAGGTCAAGG ACATATGCTC 
GCCTCGGGTC ATTTAACCTC CCTACGCGAG GCGACTGCGC TACCCGCATG TATTACCTTG 
CATGCCATCT CTAATGCACA AAGGCAGCAA GTGTTAGTCG ATCCCGTATT AACCCCTTTC 
ATATCGACTT CAACACCCCA AGGAATAAGG TTAAGCGTTC CTGTGGTACA AAAGTCTGTT 
GCATTAACGC ATTTATTACA AACACTCAAG TTAGATACGC TTTCAGTCGA ACCGCCCAGT 
TTGCAGGATA TTTTTCATTA CTACATGGAT AAGGTTGATG CTCCGTCATC CCACACTTTA 
TCGGCAGATA TTTCACTGAG AACCAATCCC ACAAAAGCAT TAATGCAGCA GACCAAACGG 
GAGTGCGTGG CATGA
 
Protein sequence
MNYQTLTCSS NANVVKAINV SKSYGKFKAL DEVSFDVLAG QMIALLGHNG AGKSTLLKLI 
LGLVTPSKGQ IQVQGQDMRS MNLRQRLSIG YLPENVSFYD NMTANELLRY FAKLKGVALH 
RVHELLAEFG LEAAKDKRLS TFSKGMRQRL GLAQAILAEP KVLLLDEPTV GLDPLASAFL 
YQKMAQLKSQ GCAIIISTHE LGLVQENMDR ALILGQGHML ASGHLTSLRE ATALPACITL 
HAISNAQRQQ VLVDPVLTPF ISTSTPQGIR LSVPVVQKSV ALTHLLQTLK LDTLSVEPPS 
LQDIFHYYMD KVDAPSSHTL SADISLRTNP TKALMQQTKR ECVA