| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3343 |
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| Symbol | |
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| ID | 5078118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3893653 |
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| End bp | 3895131 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640500544 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001184854 |
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| Protein GI | 146294430 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CGATTCTCGC TAGTACGTTA GCTTGCCTAT TTAGATCGGG CTTGTTTAGC
TGCGGATTAG TATTGGCCGC CGGATTGGTA GCCTTTGCCC TCGCGGCAGA AAATGACTCT
CTTGAAGTCG ACGTCCTTGA AATCAAAGCC TCTGAAGCTA ATGCCCCTGA AATCAATGCC
GCTGAAGTTG AGGCATTTAA GGCGCAATCA CTGGGTTTAC CCGCCAAAGA AACCGACATG
GCACATGTCA ACTTTGGCCA ATGGTTGCCT GAGTTACTCA CACAGTTCAA TCAGTTACCT
GAGGTTCAGG CGCAACTTGT AAGGCAGCAA CAGGCCAAAC TGGCCATTCA GGCGGCAAAT
CGCGCTGTGT ATAACCCAGA ACTTGGGCTT AATTATCAAA ATGCCGATAC AGATGCCTAC
AGCTTAGGGC TGAGCCAAAC CCTCGATTGG GGTGACAAGC GCGGCGTGGC GACAAAGCGT
GCCGAGCTTG AAGCACAAAT CCTGTTTGCG GACATAGGGT TAGAGCGTAG CCAAATGTTA
GCCGAACGCT TACTGGCGTT GGCAGAACAG GCGCAAAGCC GTAAGGCGCT GACCTTTGCT
GAGCAGCAAT TAAGGTTCAC CAAGGCGCAG CTCAATATTG CTGAGCAGCG ATTGGCGGCG
GGGGATTTAT CCAACGTCGA GCTGCAATTG ATACAACTCG AAGTTGCCTC TAATACTGCC
GACTACGCCT TAGCCGAGCA GGTGGCCCTA GTGGCCGATG GCAAAGTAAT TGAATTACTG
GGGGATAATA ATTTCGCTTT TAGTGAGTTT ATCAAAGAGA TCCATTTCTT TGTGACTCAG
GCTAAGCAAG CGCCAGCGGC CGAGTTGGGC ACCTCTAAAT CAGCTTTGCC AGCCTTGGCG
AGTGCTTATC AGCAAGTGCT GCTCGCCAGA GTTAATGTCA TGCAAGTCAA AGCGGAAGCT
TCAGCTGACC CGACCATTAG CCTAGGCGCT GAAAAGGAGG GCACGGACAA TAAGCTCAGT
GTCGGCGTGT CGATTCCTCT ACAAGTTCGC AATAACTACA GTGAGTTACA AGCCGTAGCC
GATAAGGGCA TCGCTATCGC GGAGCAAGGT TATCTTGCCC GTGAGCGAGT GCTTACCGCT
AAGCAGAAAC AATTCCTCTA TGCGTTACCG CGTTTACTCG AACGTTACCA AGACTGGCGC
GAGTTAGTGC AAGTGTCAGG TGCTAAAGCC GCTAAATCCT TAAGCCAACA ATGGCAGGCG
GGGGATGTGA GTACTAGCGA GTACTTGCAG AGCCGTCGTC AGTTAGCCGC CAGTTATTTG
GTGGGCTTAA ACCTAGAAAC GGCTATCTAT CAGAGTTGGT TAACTTGGAT GGGCGAAAGT
GGCCAGCTTA TGCCTTTTAT CGAAAAGCTC ATTATAGAAA AGCTAAATGC AGTCCCTTCG
ATAACATCTA ATGCCGCCGC ACGCACAGTA AACCCATGA
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| Protein sequence | MKKTILASTL ACLFRSGLFS CGLVLAAGLV AFALAAENDS LEVDVLEIKA SEANAPEINA
AEVEAFKAQS LGLPAKETDM AHVNFGQWLP ELLTQFNQLP EVQAQLVRQQ QAKLAIQAAN
RAVYNPELGL NYQNADTDAY SLGLSQTLDW GDKRGVATKR AELEAQILFA DIGLERSQML
AERLLALAEQ AQSRKALTFA EQQLRFTKAQ LNIAEQRLAA GDLSNVELQL IQLEVASNTA
DYALAEQVAL VADGKVIELL GDNNFAFSEF IKEIHFFVTQ AKQAPAAELG TSKSALPALA
SAYQQVLLAR VNVMQVKAEA SADPTISLGA EKEGTDNKLS VGVSIPLQVR NNYSELQAVA
DKGIAIAEQG YLARERVLTA KQKQFLYALP RLLERYQDWR ELVQVSGAKA AKSLSQQWQA
GDVSTSEYLQ SRRQLAASYL VGLNLETAIY QSWLTWMGES GQLMPFIEKL IIEKLNAVPS
ITSNAAARTV NP
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