Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3333 |
Symbol | |
ID | 5078108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3882455 |
End bp | 3883831 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500534 |
Product | amino acid carrier protein |
Protein accession | YP_001184844 |
Protein GI | 146294420 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCAA TTACGGAATT TGTTGGCCTA GTTAATGGCT TTGTCTGGGG CACACCTATG TTGGTGATGA TCCTTGGTGT GGGTTTGTTT CTCTCTCTCG GGCTTAGATT GATGCCCATT CTTAAATTAG GTACAGGTTT TAAGCTGCTC TGGTCTGGGC GAATTCCCGA TAAAGATAAA AATGTGAAAG GAGATGTGAG CCCTTTTAAT GCGTTGATGA CGTCACTTTC AGCCACTATT GGTACAGGTA ATATTGCGGG GGTTGCTACC GCGATTTTTA TTGGAGGCCC TGGTGCCTTA TTTTGGATGT GGTGTACAGC GTTAGTGGGG ATGGCAACTA AGTTTGCAGA GGCCGTTTTA GCGGTGAAAT ACCGTGAAGT TGATGACCAT GGTAACCATG TTGGTGGGCC TATGTATTAC ATCAAAAATG GCCTTGGTAA GAAGTGGGCT TGGTTAGGCA CATTATTTGC GATTTTTGGT TCTCTTGCTG GTTTTGGTAT TGGTAATACA GTACAGGCAA ACTCAGTTGC AGATGCGTTA AGCAGTAACT TTGGGATTCC CGCTTGGGCT TCGGGCGTGG TGATGATGCT GTTAGTTGGT GCAGTATTGA TGGGAGGGAT TAAACGTATC GCCGATGTAG CGGGTAAGTT AGTGCCCTTT ATGACAATTT TTTATATTAC CGCGGGTTTA GCTGTGTTAG CTATGCATAT TGAAGAGGTG CCTGCTGCAT TTGCCTTGAT TGTTCATAGT GCGTTTAATC CAGTTGCTGC CCAAGGTGGT TTTGCGGGGG CGGCAGTTTG GGCTGCCATT CGCTTCGGTG TCGCTCGCGG TGTGTTTTCC AATGAAGCAG GTTTAGGAAG TGCGCCTATC GCCCATGCCG CTGCGCAAAC GAATAACCCT GTAGCGCAGG GGCTTGTTGC TATGCTTGGC ACCTTTATCG ATACCATTAT TGTTTGTTCT ATTACGGGAC TAGCGATTGT GGTGTCAGGA GCATGGACTT CAGGTGAAAA TGGTGCCGCA TTGACTTCCT ACGCCTTCTC CCACGCCTTA CCGATGGGGA ATTATATTGT CGCTGTAGCT CTGGCTATTT TTGCGTTTAC AACCATTATT GGTTGGAGTT TTTATAGTGA GAAGTGTGTG CAATATCTCT TTGGTATTAA AGCAATAAAA CCATTTCGCC TACTGTGGAC GCTTGCGGTT CCCTTAGGTG CGGTGAGTTC TTTAGATTTC ATTTGGCTAT TAGCGGATAC CTTAAACGCT ATGATGGCTA TTCCGAACCT TATTGCTTTA GTGCTGTTGA GTCCTGTGGT TTTCGGTTTG ACGCGAGAAT ACTTTATTAA AAAACGCGCA GAAGAGACGG CAAAAGTGCG CACTTAA
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Protein sequence | MEAITEFVGL VNGFVWGTPM LVMILGVGLF LSLGLRLMPI LKLGTGFKLL WSGRIPDKDK NVKGDVSPFN ALMTSLSATI GTGNIAGVAT AIFIGGPGAL FWMWCTALVG MATKFAEAVL AVKYREVDDH GNHVGGPMYY IKNGLGKKWA WLGTLFAIFG SLAGFGIGNT VQANSVADAL SSNFGIPAWA SGVVMMLLVG AVLMGGIKRI ADVAGKLVPF MTIFYITAGL AVLAMHIEEV PAAFALIVHS AFNPVAAQGG FAGAAVWAAI RFGVARGVFS NEAGLGSAPI AHAAAQTNNP VAQGLVAMLG TFIDTIIVCS ITGLAIVVSG AWTSGENGAA LTSYAFSHAL PMGNYIVAVA LAIFAFTTII GWSFYSEKCV QYLFGIKAIK PFRLLWTLAV PLGAVSSLDF IWLLADTLNA MMAIPNLIAL VLLSPVVFGL TREYFIKKRA EETAKVRT
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