Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3329 |
Symbol | |
ID | 5078104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3877553 |
End bp | 3877987 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640500530 |
Product | response regulator receiver protein |
Protein accession | YP_001184840 |
Protein GI | 146294416 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAGTT CAAATAGCTA CACTCAAGTG ACAATTTTAC TGGTCGATGA CGATGATGTT GATTATATGG CTGTTCAGCG TGCAATGAAG CAGCTTCGCT TATTGAATCC TTTGATACGC GCCAGAGACG GACTTGAGGC GTTACATATT CTGACTAATC CCGAGGCGAT TAAGGGGCCC TATCTCATAC TGTTGGATTT AAATATGCCG AGGATGAATG GCTTTGAGTT TCTTGAGCAT CTTCGATCCG ATCCAACACT TTCTTCCTCT GTGGTTTTTA TGTTAACCAC CTCAAGTACC GATGAAGATC GGATGAAAGC CTATAGTCAT CATGTGGCGG GCTATATGGT GAAAACGGAT ATAAAAGACG GTTTTAATAA TATTTTTAAT ATGTTGGAAG GTTACTGGCG TATTGTTGAG CTTCCATCGG CATAG
|
Protein sequence | MSSSNSYTQV TILLVDDDDV DYMAVQRAMK QLRLLNPLIR ARDGLEALHI LTNPEAIKGP YLILLDLNMP RMNGFEFLEH LRSDPTLSSS VVFMLTTSST DEDRMKAYSH HVAGYMVKTD IKDGFNNIFN MLEGYWRIVE LPSA
|
| |