Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3317 |
Symbol | |
ID | 5078092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3867043 |
End bp | 3867942 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500518 |
Product | GumN family protein |
Protein accession | YP_001184828 |
Protein GI | 146294404 |
COG category | [S] Function unknown |
COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.174561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACAA GCCACAGACG ACTCATCGCC GCAATCAGTT GTGTGACATT ATTTTTTCAT GCCGCAATTT TTGCGGCACC AAGCGATAAA CCGCCGTTTT ATCAAGTGCA GTGGCAGGGT AAAAGTGCCT ATTTATTGGG ATCAATTCAT ATTGGTAATC GCGACTTTTA TCCCTTACCT GAGCAAATTG AAACAGCGTT TAGCAAAGCC AAGGGGTTAG TGGTTGAAGT CGATATGAAT AAAGTCGATA GCCGCGCGCT ATTGCAAAAG TATGGGATGG CAGATGGCAC TAAGGGCTTA GATTGGCAGA ACCGCGATAA GCAAACTGTT GAGAGTATGA CGCTTTACTG TGCGAGTAGA ACAAGTGTAT GTCAGTCAAT TCAATCATTT GCACCTTGGT TACAGGCGAC TCAACTCAAT CTCTTACGTT ACAATGGCTT AGGTTATAGC ACTGATTATG GTGTTGATGC ACAGTTGATG GCTCGTAATA AAACACTGCC AGTGTTTGAG CTGGAAACCG CAGAATCTCA ATTTCAGTTG TTAGCTACGT TCGACAGCCA AGAGCAGTGG TCTATGGTGC GAGATGCGAT TAGTGTGTCG GATGATGAGC TTTTATCGCT GATAACGGCG TGGCGTTCGG GTGACGAGAT CGAACTTGAT ACTATTATGC AAGAACAGAT GGGCGGCGAG GGTGATACTC GGATTCTAGA TAAGATCCTA TGGCAGCGAA ATCACACAAT GGCCGAGGGT ATTCTTAAGC TTATGGATGC CAGTGATGTG CCAGCACCGT TATTTGTGGT GATTGGGGCT GGTCATGTTG TGGGTGATAA GAGTGTTGTG CAGTTACTTA AACAGGCGGG TGCTAAGGTG ACCGCCTGTT GGAGTGATAC TTGTCTTTAA
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Protein sequence | MATSHRRLIA AISCVTLFFH AAIFAAPSDK PPFYQVQWQG KSAYLLGSIH IGNRDFYPLP EQIETAFSKA KGLVVEVDMN KVDSRALLQK YGMADGTKGL DWQNRDKQTV ESMTLYCASR TSVCQSIQSF APWLQATQLN LLRYNGLGYS TDYGVDAQLM ARNKTLPVFE LETAESQFQL LATFDSQEQW SMVRDAISVS DDELLSLITA WRSGDEIELD TIMQEQMGGE GDTRILDKIL WQRNHTMAEG ILKLMDASDV PAPLFVVIGA GHVVGDKSVV QLLKQAGAKV TACWSDTCL
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