| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3289 |
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| Symbol | psd |
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| ID | 5078362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3830375 |
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| End bp | 3831244 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500490 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001184800 |
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| Protein GI | 146294376 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAAG TCAAAATTGC TCTGCAGTAC ATGCTGCCAA AACATTTATT ATCACGTCTA
GTGGGTAAAC TGGCTGCGGC TGAAGCGGGC ACGTTAACAA CTGCGGCGAT TAAATGGTTT
ATCAAACAAT ATAAAATCGA CATGAGTGAA GCGGCACAAA GCGAGCCACA GGCCTATAAA
AGTTTTAACG ATTTTTTCAC CCGCGCATTA AAGCCGGGGA TTCGTCCGAT AAATCAACAT
ACTAATATTA TGGTACATCC GGTTGATGGT GCCGTTAGCC AACTTGGCCC AATAAAAGAA
GGTCGAATCT TCCAAGCAAA AGGTCATCAT TACTCATCTC TCACTTTACT TGGCGATCAA
GTTCAAGATG CCAAACGTTT TGAAGGCGGG GATTTTGCGA CAATCTACTT AGCACCGAAG
GACTACCACC GAATTCACAT GCCGATAAAA GGTACATTAT CAAAAATGAC CTACGTTCCC
GGTGAGCTGT TTTCGGTTAA TCCGCTAACA GCAAGACATG TACCCGGCCT TTTCGCCCGT
AACGAACGTG TGGTCGCCAT TTTTGAAACC GAACATGGCC CATTAGCCAT GGTATTAGTC
GGCGCCACTA TCGTTGCCAG CATCGAAACC GTCTGGGCTG GCACAATCAC GCCACCGACA
GGTAAGCAAG TCTTTACTTG GGAATATCCC ACGGTTGGCC CTGATGCCAT CACCTTAGAC
AAGGGCGATG AAATGGGTCG CTTTAAGTTA GGCAGTACTG TCGTCATGTT ATTTGCTAAA
GACGCTATCG ATACCTTCGC TGAAGGAGTG GAAGCCGAAG CAGTTACACG CATGGGTCAA
GCCTTTGCTA ATCTTAATAA TCCGAAGTAA
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| Protein sequence | MDKVKIALQY MLPKHLLSRL VGKLAAAEAG TLTTAAIKWF IKQYKIDMSE AAQSEPQAYK
SFNDFFTRAL KPGIRPINQH TNIMVHPVDG AVSQLGPIKE GRIFQAKGHH YSSLTLLGDQ
VQDAKRFEGG DFATIYLAPK DYHRIHMPIK GTLSKMTYVP GELFSVNPLT ARHVPGLFAR
NERVVAIFET EHGPLAMVLV GATIVASIET VWAGTITPPT GKQVFTWEYP TVGPDAITLD
KGDEMGRFKL GSTVVMLFAK DAIDTFAEGV EAEAVTRMGQ AFANLNNPK
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