| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3277 |
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| Symbol | |
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| ID | 5078346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3815928 |
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| End bp | 3816821 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640500474 |
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| Product | HflC protein |
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| Protein accession | YP_001184788 |
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| Protein GI | 146294364 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000125944 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAGAT TAGGTATTAT TCTTATCGCC ATCGTTTTAG GTGTTGTCCT ATCCTCTGTG
ATGGTTGTGA GTGAAGGTGA GCGAGCTATC GTCGCACGTT TCGGCGAAAT CGTGAAAGAT
AACGTTGATG GCAAACCTAT GACTCGCGTT TTCGGTCCTG GATTACACTT TAAAGTGCCA
GTGATTGATA AAGTTAAGTT ACTTGATGCT CGTATTCAGA CATTGGACGG TGCTGCGGAT
CGTTTCGTTA CCTCAGAGAA GAAAGATCTG ATGGTGGATT CCTACGTTAA ATGGCGCATT
TATGATTTCG AAAAATACTA CCTGTCCACA AATGGTGGTA TTAAAGCGAA TGCAGAATCG
CTATTACAAC GTAAGATAAA CAACGATTTA CGTACTGAGT TTGGTCGCCG CACTATCAGA
GAAATTGTTT CAGGTAAGCG CGATGAATTG CAGAACGATG CGCTCGCAAA TGCATCTGAA
AGTGCAAAAG ACTTAGGTAT TCAGGTTGTT GACGTACGTG TAAAGCAAAT CAATTTACCT
GCGAACGTCA GTAACAGTAT CTATCAACGT ATGCGTGCCG AACGTCAGGC TGTGGCAAAA
GAGCATAGAG CACAGGGTAA AGAGCAATCT GAAATTATCC GTGCGACTAT TGACGCTAAT
GTCACCGTTA AGATTGCTGA AGCTGAACGT AAAGCACTCA CTATTCGTGG TGAAGGGGAT
GCATTAGCCG CAAAGATTTA TGCTGATGCT TACAACAAAG ATCCTGAATT TTTTGGTTTT
ATGCGTAGTT TAGAGGCTTA TCGTGCAAGT TTCTCTGGTA ATTCAGATAT CATGGTCTTA
GAGCCTGATA GTGAGTTCTT CAAATATATG AAGAGTACAT CACCTAAGAA GTAA
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| Protein sequence | MGRLGIILIA IVLGVVLSSV MVVSEGERAI VARFGEIVKD NVDGKPMTRV FGPGLHFKVP
VIDKVKLLDA RIQTLDGAAD RFVTSEKKDL MVDSYVKWRI YDFEKYYLST NGGIKANAES
LLQRKINNDL RTEFGRRTIR EIVSGKRDEL QNDALANASE SAKDLGIQVV DVRVKQINLP
ANVSNSIYQR MRAERQAVAK EHRAQGKEQS EIIRATIDAN VTVKIAEAER KALTIRGEGD
ALAAKIYADA YNKDPEFFGF MRSLEAYRAS FSGNSDIMVL EPDSEFFKYM KSTSPKK
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