Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3249 |
Symbol | |
ID | 5080090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3776287 |
End bp | 3777432 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640500446 |
Product | galactokinase |
Protein accession | YP_001184760 |
Protein GI | 146294336 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0153] Galactokinase |
TIGRFAM ID | [TIGR00131] galactokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAACC CTGCGCAGCG CGCCACTAAG TTATTTGTCC AAACCTTTGG CACTAAAGCC GATGATTTAT ATCAAGCCCC AGGCCGAGTC AATTTGATCG GCGAATATAC TGATTACAAC GATGGTTTTG TATTACCAGC AGCCATTAAT TTTCATACCG TTATTGCGGT TAAGCGTCGT GAAGATACCA AGTTTCGCGC CGTTACCGAT GCCTTTCCTG GACAACTCAA AGAGTGGACC TTCGGCCAAG AGGGGCATAT TGATCCGGCT GATGGCTGGG TGAATTATCT AAAAGGACTC ACAGCGGCCA TGGCTCACAC AGGCCTATTA GCAAAAGGAC TGGATTTAGC CATAGTGGGT GATGTTCCTT TAGCTGCGGG TTTATCTTCT TCAGGGGCGC TTGTGGTTGC TTTTGGCACC GCAATCAGTG ATAGCAGCCA ACTACACTTA TCCCCCATGG CAGTCGCGCA ATTAGCCCAG CGTGGTGAGC ATAGATATGT TAAATCGGCC TGCAGCATTA TGGATCATAT GATCAGTGCC ATGGGTGAGC AGGACCACGC TTTACTGATC GACTGTTTGG ATCTCGACAG TGAAGCCATT TCGATCCCCG AAAATTTAAG CCTTATCATC ATAGATGCTC ATATTGAAAA ACAGCGTTTA GCGGCCACCA ATCAACAACG CCGCGATGAG TGTGCTCAAG CTGCTGAATA TTTTGGTTTA GATGCATTGC GCCACTTGGA TTTGCGTCAG TTAGAAAGTG CTAAAGATAA ATTAACTGAC ACTCTATATC GCCGCGCCAA ACATGTAGTG ACCGAGAATA AACGCACTCA GAGTGCTGCG CGCGCACTCG AACAAAATAA TATCACTAAA TTTAGCCAGT TAATGGCGCA ATCCCATGCC TCACTCAGGG ATGATTTTGA AGTGACCTTG CCCGAATTTG ACACCTTAGT TGACATTGTT GGCCAAGTGA TAGGAGTACG TGGCGGCATA CGTATGACAG ATGGTTGTGT CGTGGCTTTA GTGGATCATG AACTTACCGA TGAGGTCGTT GCGGCTGTAG AGCATGATTT TTTCGAGAAA ACAGGGATCG ATGCCACAGT CTATTTATGT TCTGCAAGTG CTGGAGCGGG TCGTATCGAT AACTAG
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Protein sequence | MSNPAQRATK LFVQTFGTKA DDLYQAPGRV NLIGEYTDYN DGFVLPAAIN FHTVIAVKRR EDTKFRAVTD AFPGQLKEWT FGQEGHIDPA DGWVNYLKGL TAAMAHTGLL AKGLDLAIVG DVPLAAGLSS SGALVVAFGT AISDSSQLHL SPMAVAQLAQ RGEHRYVKSA CSIMDHMISA MGEQDHALLI DCLDLDSEAI SIPENLSLII IDAHIEKQRL AATNQQRRDE CAQAAEYFGL DALRHLDLRQ LESAKDKLTD TLYRRAKHVV TENKRTQSAA RALEQNNITK FSQLMAQSHA SLRDDFEVTL PEFDTLVDIV GQVIGVRGGI RMTDGCVVAL VDHELTDEVV AAVEHDFFEK TGIDATVYLC SASAGAGRID N
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