| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3245 |
|---|
| Symbol | |
|---|
| ID | 5080086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3771220 |
|---|
| End bp | 3771813 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640500442 |
|---|
| Product | FxsA cytoplasmic membrane protein |
|---|
| Protein accession | YP_001184756 |
|---|
| Protein GI | 146294332 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTCA TTCTATTTTT ACTTTTTGTG CTGATCCCTG TGGTTGAGCT ATCGGTGCTA
ATACGTGTTG GTGAAGTGTT AGGAACGTGG ACCACCATTG GCTTAGTTCT CTTTACCGCG
ATACTTGGGG TATCACTGGT GCGCAGCCAA GGGATCAGTA CTTTAATGCA AGTGCAACAA
AAGCTCACAA GGGGCGAAGC ACCTGGGCAA GAAATTGTCG AAGGCATGAT GCTAGCGATG
GCGGGTGTGT TGTTGGTTAT ACCCGGATTT GTAACGGATT TTATTGGCTT ATTGCTTTTA
ACACCGTTAA CTCGTCGCCC TATTGCTGCT TTGGTCTTTA AACGTATGCA GTTACGCGTG
GTTGCGGGAT TGCATGGTGG AATGAAGGGC GGTTTTGGTG AAGGGCCATT TAGTCAGCAT
ACACAAGACC CGGGATCTAA CCCATTTGGA CACTCACCTT TTGAACAGGA TAAACCCGCT
CAGGGAAATA CCTATGAGGG CGATTTTGAG CATAAAGAGG ATCCTCTCGA GCACAAGCCA
AGGATCCACC AAGTTTCAGA TAAAGACATA GATCCAAAGG ATCCTAAGAT TTAG
|
|---|
| Protein sequence | MLFILFLLFV LIPVVELSVL IRVGEVLGTW TTIGLVLFTA ILGVSLVRSQ GISTLMQVQQ
KLTRGEAPGQ EIVEGMMLAM AGVLLVIPGF VTDFIGLLLL TPLTRRPIAA LVFKRMQLRV
VAGLHGGMKG GFGEGPFSQH TQDPGSNPFG HSPFEQDKPA QGNTYEGDFE HKEDPLEHKP
RIHQVSDKDI DPKDPKI
|
|---|
| |