| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3212 |
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| Symbol | |
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| ID | 5080155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3740124 |
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| End bp | 3741347 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640500409 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_001184723 |
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| Protein GI | 146294299 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000960578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGTT CACAAGCCTA TGACATTGCC ATTGTGGGTG GCGGCATGGT GGGACTCGCC
ACCGCGATTG GATTGGCGCA GGCCGATTTA AATGTCGTCG TTATTGATGC GGGCCATACG
CAGGCCGTTG TCGGCGAACC GCGTTTGCGG GTGAGTGCCA TCAATAAGGC GAGTCAACGC
TTATTGGAAC ACTTAGGTGC GTGGACATAC TTAGATACAA ACCGTGCCAC GCCTTATCAA
AAAATGGCTG TGTGGGATAA AGACGGTTTT GGCAAAATTG CCTTCGATGC CAGTAGTATC
AGTGAGCCTA GCCTCGGCGC GATTATCGAA AACGACGCCA TTAGCTTTGC CCTCGCCAAA
CGTGCCAGTG AGTTTGACAA TATTACCCAT ATCCAAAACC ACCGCCTCGA GCGCATTGCC
TTTGGTGATC GTGAGGCTTG GTTGACCTTA GCCGATAGCG CCGATTCTGA AATCGAAAGT
GTTAGTGCAG CCTTGGTGAT CGCCGCCGAT GGCGCCAATT CTTGGGTACG TGAGCAGTGC
AAGATCCCAT TGACGTTTTG GGATTATGGT CATCACGCGA TTGTTGCAAC TATCCGTACG
GAATTACCGC ACCTTGCCAC CGCCCGCCAA GTGTTTTTAC AGGACGGCCC GCTAGCATTT
TTACCTTTGT ATGAAGACAA TCTCTGCTCC ATCGTCTGGT CGGTACCGCC CGAGCGCGCC
ACTGAATTAC TGGCGATGGA CAAAGTGCAA TTTGAGCGTA GCTTAACCGC CGCCTTCGAT
GGCCGCCTCG GGATTTGCAA GCTTGAAAGT GAGCGCCAAG CCTTCCCATT ACGAATGCGC
TACGCCCGCC ATTTTGCCCG TCACCGCCTG TTATTAGCAG GCGATGCGGC TCATACGATT
CATCCGCTGG CAGGTCAAGG GGTTAACCTC GGCTTTTTAG ATGCGGCGAG TATTATCGAA
GTGGTCAGTG AGCTACATAC AGCAGGTAAG GATATTGGGG ACTATGCACA CTTGCGTGCG
TTAGAGCGTT GGCGCAAGGC CGATGCGATG GAGATGATTG CGGTGATGGA AGGGTTTAAA
CGCCTATTCG AAGGTTCAAA TCCGGTCAAA AAGGCCATTC GCGATTTGGG ATTAAACCTA
GTTGATAATG TCGCTGGGCT GAAAACAGTG TTCATGCAAC AGGCCATGGG CAATAAGTCG
TCGCTGCCTA AGTTATGTCG TTAG
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| Protein sequence | MLSSQAYDIA IVGGGMVGLA TAIGLAQADL NVVVIDAGHT QAVVGEPRLR VSAINKASQR
LLEHLGAWTY LDTNRATPYQ KMAVWDKDGF GKIAFDASSI SEPSLGAIIE NDAISFALAK
RASEFDNITH IQNHRLERIA FGDREAWLTL ADSADSEIES VSAALVIAAD GANSWVREQC
KIPLTFWDYG HHAIVATIRT ELPHLATARQ VFLQDGPLAF LPLYEDNLCS IVWSVPPERA
TELLAMDKVQ FERSLTAAFD GRLGICKLES ERQAFPLRMR YARHFARHRL LLAGDAAHTI
HPLAGQGVNL GFLDAASIIE VVSELHTAGK DIGDYAHLRA LERWRKADAM EMIAVMEGFK
RLFEGSNPVK KAIRDLGLNL VDNVAGLKTV FMQQAMGNKS SLPKLCR
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