| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3209 |
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| Symbol | |
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| ID | 5080152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3735349 |
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| End bp | 3738237 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640500406 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_001184720 |
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| Protein GI | 146294296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.294821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGC AAACCCTCAC TCAGTTAGAA CAGCACGATT TATTCCTACG TCGTCATATC
GGCCCTGATA GCAGTCAACA GCAAGCCATG CTGAACTATG TTGGTGCCGA GTCACTGGAT
GATTTGACCG CGCAAATCGT GCCTGAGTCG ATCCGTTTAA GCCAAGAGTT GAGCATTGGT
GATTCCTGCG GCGAAGCCGA AGGCATTGCT TACATTCGTG GTTTAGCGAA ACAAAATCAA
GTCTTCAAAA GCTACATTGG TATGGGTTAC TACGGTACCC AAGTCCCGAA TGTGATTTTG
CGTAACGTCT TAGAAAATCC AGGTTGGTAC ACGGCTTACA CGCCCTATCA GCCAGAGATC
GCCCAAGGCC GTTTAGAAGC CATTCTAAAC TTCCAACAAG TGTCGATGGA TTTAACCGGA
TTAGATTTGG CTTCAGCGTC ACTGCTTGAC GAAGCAACCG CGGCTGCCGA AGCGATGGCG
CTGGCCAAGC GGGTTTCTAA AGCGAAAAAA GCCAATATCT TCTTCGTTGC CGATGATGTG
TTCCCGCAAA CCTTAGACGT AGTGAAAACC CGCGCTGAGT GTTTTGGTTT TGAAGTGGTG
GTAGGCCCTG CATCTGAGGC CGTTAACCAT GAGCTGTTTG GTGCCTTGTT CCAATATACT
AACCGTTTCG GTCAAATCAC TGACTTCACT GAATTATTCG CCGAATTGCG CGCCAAGAAT
GTGATTGTAA CTGTGGCTGC TGACATCATG TCGTTAGTGT TACTGAAATC ACCGGGCGCT
ATGGGCGCCG ATGTGGTCTT CGGTAGTGCG CAGCGTTTTG GCGTGCCAAT GGGCTTTGGT
GGTCCACACG CTGCCTTCTT CGTGGCCCGT GACGAACATA AACGCTCTAT GCCTGGCCGT
ATCATTGGTG TGTCAAAAGA CGCCCGTGGT AACCGTGCAC TGCGTATGGC GATGCAAACT
CGCGAGCAAC ATATCCGCCG CGAAAAAGCC AACTCAAATA TTTGTACTGC ACAAATTCTG
TTAGCGAACA TGGCGTCTTT CTACGCCGTA TTCCACGGCC CTGATGGCCT GAAAACTATC
GCTTCACGTA TTCACCGTTT CGCCGATATT TTAGCGGCCG GTTTACAAGC GAAGGGTGTG
AGCTTAGTCA ACAGCACTTG GTTCGATACC CTCAGCATCA AAGGCTTAGA TGTTGCTGCC
GTGAATGCGC GCGCACTGGC CGCTGAAATG AACCTACGTT TTGATGCCGA TGGCACTGTG
GGCGTGAGCT TAGATGAAAC GACACTGCGC ACCGATATCG ACGCCCTGTT CGATGTAATT
TTAGGTGCCG GCCATGGTTT AGATGTTGCC GCGTTAGACG CGCAAATCGT CGCCCAAGGT
AGCCAATCGA TTCCTGCTGC ACTCGTGCGC CAAGATGCGA TTTTAAGCCA CCCAACCTTT
AATCGCTACC AAAGCGAAAC CGAGATGATG CGTTATATCA AGCGTCTCGA AAGTAAAGAC
TTAGCTCTGA ACTACTCGAT GATTTCATTG GGCTCATGCA CCATGAAGTT AAACGCAGCG
GTTGAAATGA TCCCCGTAAG CTGGCCAGAA TTTGCCAACA TGCACCCCTT CTGCCCACTG
GATCAAGCCA AAGGTTACAC TCAGCTGATC GAAGAACTGT CTTCATGGTT AGTGAATGTA
ACGGGTTACG ATGCCGTGTG TATCCAACCT AACTCTGGTG CGCAAGGCGA ATACGCTGGC
TTGTTAGCCA TCAAGAAATA CCATGAGTCA CGTGGCGATG CGCACAGAAA CATCTGTTTA
ATCCCGCAAT CTGCTCACGG TACTAACCCT GCATCGGCAC AATTAGCCGG TATGCAAGTG
GTGGTGACGG CGTGCGATAA GCAAGGTAAC GTCGATTTAG AAGATCTGAA GACGAAAGCT
GCCGAAGTGG CCGAAAACCT GTCTTGCATT ATGATTACTT ACCCATCGAC CCACGGTGTG
TATGAAGAAT CTATCCGCGA AATCTGCGAC ATAGTGCATC AGCACGGCGG TCAAGTGTAT
TTAGATGGCG CCAATATGAA CGCCCAAGTT GGCTTAACGT CTCCTGGCTT TATCGGTGCC
GACGTATCAC ACCTTAACCT GCATAAGACC TTCGCGATTC CACACGGCGG CGGTGGTCCA
GGTATGGGCC CAATCGGCGT GAAATCACAC TTAGCGCCGT TTGTCGCCGG TCACGTTGTG
GTTAAACCGG GCCGCGTGAG CGACAACAAC GGCGCCGTAT CGGCTGCACC TTACGGTAGC
GCTGGCATTC TGCCAATAAG CTGGATGTAC ATTAAGCTGC TTGGTTCAAA CGGTCTTAAA
AAGTCGACCC AAACTGCGCT GTTAAATGCT AACTATGTGA TGAAGAAGCT GTCGGAACAC
TACCCAGTAT TGTTCCGTGG CCGTAACGAT CGCGTCGCGC ACGAATGTAT TATCGACCTA
CGTCCACTGA AAGAAGCCTC AGGCGTGACC GAAATGGATA TCGCTAAGCG TTTGAATGAC
TACGGTTTCC ACGCACCAAC CATGAGTTTC CCGGTTGCGG GAACCCTGAT GATTGAGCCA
ACGGAATCTG AGTCTAAGGT GGAACTCGAT CGTTTTATCG ACGCTATGGT GTCAATCCGC
GCCGAAATCG CCAAAGTGGA ATCGGGTGAA TGGCCAGCGG ACAATAACCC GCTGCACAAC
GCACCGCACA CTATGGCTGA TATCATGGAC CCAGAGTTTG ATACGCGTCC ATACAGCCGT
GAAGTGGCCG TGTTCCCAAG TGCAGCAGTA CGCACTAACA AGTTCTGGCC AACCGTGAAT
CGTATCGATG ATGTCTACGG CGACCGTAAC TTGATGTGTT CGTGTGCACC ATTATCAGAC
TACGAGTAA
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| Protein sequence | MTKQTLTQLE QHDLFLRRHI GPDSSQQQAM LNYVGAESLD DLTAQIVPES IRLSQELSIG
DSCGEAEGIA YIRGLAKQNQ VFKSYIGMGY YGTQVPNVIL RNVLENPGWY TAYTPYQPEI
AQGRLEAILN FQQVSMDLTG LDLASASLLD EATAAAEAMA LAKRVSKAKK ANIFFVADDV
FPQTLDVVKT RAECFGFEVV VGPASEAVNH ELFGALFQYT NRFGQITDFT ELFAELRAKN
VIVTVAADIM SLVLLKSPGA MGADVVFGSA QRFGVPMGFG GPHAAFFVAR DEHKRSMPGR
IIGVSKDARG NRALRMAMQT REQHIRREKA NSNICTAQIL LANMASFYAV FHGPDGLKTI
ASRIHRFADI LAAGLQAKGV SLVNSTWFDT LSIKGLDVAA VNARALAAEM NLRFDADGTV
GVSLDETTLR TDIDALFDVI LGAGHGLDVA ALDAQIVAQG SQSIPAALVR QDAILSHPTF
NRYQSETEMM RYIKRLESKD LALNYSMISL GSCTMKLNAA VEMIPVSWPE FANMHPFCPL
DQAKGYTQLI EELSSWLVNV TGYDAVCIQP NSGAQGEYAG LLAIKKYHES RGDAHRNICL
IPQSAHGTNP ASAQLAGMQV VVTACDKQGN VDLEDLKTKA AEVAENLSCI MITYPSTHGV
YEESIREICD IVHQHGGQVY LDGANMNAQV GLTSPGFIGA DVSHLNLHKT FAIPHGGGGP
GMGPIGVKSH LAPFVAGHVV VKPGRVSDNN GAVSAAPYGS AGILPISWMY IKLLGSNGLK
KSTQTALLNA NYVMKKLSEH YPVLFRGRND RVAHECIIDL RPLKEASGVT EMDIAKRLND
YGFHAPTMSF PVAGTLMIEP TESESKVELD RFIDAMVSIR AEIAKVESGE WPADNNPLHN
APHTMADIMD PEFDTRPYSR EVAVFPSAAV RTNKFWPTVN RIDDVYGDRN LMCSCAPLSD
YE
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