| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3156 |
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| Symbol | |
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| ID | 5078500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3674957 |
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| End bp | 3675868 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500353 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001184667 |
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| Protein GI | 146294243 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000483738 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGATT TAAACGGTAT GATGCTATTT GCAGCCGTAG TTAGAGCAAA GGGATTCTCC
CAAGCTGCAC GTGAAACCGG CCACCCAAAA TCCACCATTA GTCGCAAAAT CGCGCAGCTT
GAAGAACAAC TTGGCGTACG ATTATTACAG CGCGACACCC GTAACCTGAG TTTGACCCAA
GTCGGGGCAC TCTTTTATCA ACACTGTGAT TCCATTCGCA ATGAGGTAGA AGCGGCCAAG
GCAGTTATCG AGAATACTCA CGATGATGTG TCAGGATCAT TACGAATTGC AATCCCGGTA
TCATTTAGCC AAGAATTAAT CGCTAACCTC TGTAGCGGAT TTATGCGTTT ATATCCCAAT
GTGGAATTAG ATGTCCAGTT TACTGACAAT GATATAGGTT TAGTCGGTGA AGGATATGAC
ATCGCTATCA AATATGGTCC ACTGCAATCA TCGGACTTAG TGGCAAGATT ATTGTTTGAA
CGCCAGCCCA TTTTAGTCGC AAGTCCGAGT TATCTAAAAC TCAGGGGAAC GCCCGCAACA
CCACAGGAAC TCAGTCAGCA CAGTGGCATT TTATTAGGGA CTTCACGCTC AGCACCTATC
TGGCCCCTCG GCAAAGGCCC ACGAAAAACT ATGGTGAACT TCCAACGTAA GGTGCGAGTC
AATAGCCCTA TCATGGTAAA GCAGTTAGCC ATGGATGATT TTGGCATTGC CATGCTATCT
AATTCTGCTT GTAAGACAGA ACTCGCCAAT GGACAGCTAG TGCCAATCTT ACAGGAATGG
CCGATTGAAC CTTTTAAGGT TTATGGGGTT TATTCGAGTC GACGCCAACT GGCAACCAAT
ATCAGCGTGT TTTTGGACTT CTTTGTAAAA CGCTTTAGCA GCCAAGAAAG CCTGCAATCG
TTAATGGGCT AA
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| Protein sequence | MPDLNGMMLF AAVVRAKGFS QAARETGHPK STISRKIAQL EEQLGVRLLQ RDTRNLSLTQ
VGALFYQHCD SIRNEVEAAK AVIENTHDDV SGSLRIAIPV SFSQELIANL CSGFMRLYPN
VELDVQFTDN DIGLVGEGYD IAIKYGPLQS SDLVARLLFE RQPILVASPS YLKLRGTPAT
PQELSQHSGI LLGTSRSAPI WPLGKGPRKT MVNFQRKVRV NSPIMVKQLA MDDFGIAMLS
NSACKTELAN GQLVPILQEW PIEPFKVYGV YSSRRQLATN ISVFLDFFVK RFSSQESLQS
LMG
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