Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3143 |
Symbol | |
ID | 5078487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3654310 |
End bp | 3655668 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640500340 |
Product | amino acid carrier protein |
Protein accession | YP_001184654 |
Protein GI | 146294230 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTG AAGTCTTGCT CAGCAGCCTA AACGGTATTG TATGGGGTCC TATCACACTT TGTTTATTAG TTGGCACAGG GATTTATCTC ACTGCGCGGC TAAAGCTTAT CCAAGTTTTT CGTTTGCCTA TGGCGCTCGG ACTATTATTT AAACCCGCCA AAGGCCATGG TGATTTATCC TCCTTCGCCG CACTCTGTAC TGCGTTATCA GCCACGATTG GTACCGGTAA TATTGTTGGC GTGGCGACGG CGATCAAAAT GGGAGGGCCT GGGGCCTTAT TTTGGATGTG GTTGGCGGCC TTTTTTGGTA TGGCGACTAA ATATGCCGAG TGTATGTTGG CGGTAAAATA TCGAACAACC GATGCGAGAG GTCAGATAGC AGGTGGCCCA ATGTACTATA TCGAGCGTGG CCTTGGTCTG CATTGGATGG CAAAGTTATT TGCACTTTTT GGCGTTGGCG TAGCGTTTTT TGGTATTGGC ACTTTTGCAC AGGTGAATGC CATCAGCGAT GCGCTGACGA TTGCCTTTGA GGTGCCGACT TGGTTAACGG CTGTGGTGTT AACTATGCTG GTTGCGGCTG TCACGTTAGG GGGCGTTAAG CGCATTTCGA ATGTGGCACA AAAGCTGGTG CCTGCTATGT CGATTGGCTA TATCCTTGCC TGTTTGTGGA TATTGATTAG TTTTGCCGAT CAGATTATGC CTGCGCTTGG TCTTGTGATT GAATCGGCAT TTACCCCATT ATCTGCGGCG GGCGGATTTT TAGGCGCGAC GGTTGCTCAA GCCATTCAAA TTGGTATTGC TCGGGGGGTG TTTTCGAATG AGTCGGGTCT TGGCAGCGCT CCCATTGCAG CAGCTGCGGC AAAAACCAAT GAACCAGTAG AGCAGGGGCT TGTCAGTATG ACGGGCACTT TTTTCGACAC CATCATCATT TGTACTATGA CGGGCTTAGT GCTGATTATT ACAGGTGTAT GGAGCGGTGA TACCGCGGGC GCTGCAATGA CTAGCGCGGC ATTTGCCCTC GGGGGCTCTG CGGTTGTCGG CCAATATTTA GTGACAATTG CCCTCGTTTG TTTTGCTTTT ACGACCATTT TAGGTTGGCA TTATTATGGT GAACGCTGCT GGTACTATCT GGTGGGTGAG CGCGGCTTAC GTGTGTATCA AGTGGTTTTT CTTGTCTTAA TCGGGGGAGG AGCATTTATC AAATTAGATG TGATTTGGCT ATTAGCCGAT ACTGTCAATG GCCTAATGGC TATCCCTAAT TTGATTGCTA TTGTGGGTTT GCGTCATATC ATTATTGCCG AGACTCAACA TTACTTTGCG CGAATGCTCC CAAGCCGCAA CGTAGAGACT ATTTATTAG
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Protein sequence | MSFEVLLSSL NGIVWGPITL CLLVGTGIYL TARLKLIQVF RLPMALGLLF KPAKGHGDLS SFAALCTALS ATIGTGNIVG VATAIKMGGP GALFWMWLAA FFGMATKYAE CMLAVKYRTT DARGQIAGGP MYYIERGLGL HWMAKLFALF GVGVAFFGIG TFAQVNAISD ALTIAFEVPT WLTAVVLTML VAAVTLGGVK RISNVAQKLV PAMSIGYILA CLWILISFAD QIMPALGLVI ESAFTPLSAA GGFLGATVAQ AIQIGIARGV FSNESGLGSA PIAAAAAKTN EPVEQGLVSM TGTFFDTIII CTMTGLVLII TGVWSGDTAG AAMTSAAFAL GGSAVVGQYL VTIALVCFAF TTILGWHYYG ERCWYYLVGE RGLRVYQVVF LVLIGGGAFI KLDVIWLLAD TVNGLMAIPN LIAIVGLRHI IIAETQHYFA RMLPSRNVET IY
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