| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3130 |
|---|
| Symbol | |
|---|
| ID | 5078474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3636592 |
|---|
| End bp | 3638076 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640500327 |
|---|
| Product | poly(A) polymerase |
|---|
| Protein accession | YP_001184641 |
|---|
| Protein GI | 146294217 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000172182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCCG CCAGATTTTT TAATCACATA ACAGATCACA TTTCGAGGTG TCCCATTTTT
CGCCGTATCA GCCAATTCTG CAAGCAGCTA TTTGAAGACG CGCCTAAAAC GACCGCTCCA
ACTCCAGCTC AGATCCAATC TCAAGCGTCA GAAGCTTCTT CTAACGCCTT AAGCCTAGAG
TTAGTGCCCA GAGATGCCCA CTCCATCTCG CGCAAGCAAA TTAGCGAAAA TGCCCTTAAG
GTATTATACA GACTGAATAA ATCAGGATTT AAAGCCTATT TGGTCGGCGG CGGTGTGCGT
GATTTACTCC TCGGACTCGA GCCTAAAGAT TTCGACGTTG TTACTAACGC AACCCCAGAA
GAAATCAAAA AACTGTTCCG CAATTGCCGA GTCGTCGGCC GCCGTTTCCG TCTCGCCCAT
ATCGTCTTTG GTCGGGATGT GATTGAAGTC GCCACCTTTC GTGGTCACCA TGGCGAAAGC
AATGAAAAAA TTTCCAAAGC CAACGCAGAA GGCCGCTTAC TGCGCGATAA CGTCTATGGC
GAAATAGATG AAGATGCCGA GCGCCGCGAC TTTACTGTCA ATGCCCTCTA TTACGATATC
AGCGATTATT CTATCCGCAG CTACGGTGGC GGCATGGCTG ATCTCAAGGC GGGTACCTTA
AGATTAATCG GCGATCCTGA AACACGTTAT CGTGAAGATC CCGTTCGTAT GCTAAGGGCC
GTACGTTTTG CGACTAAGCT CAGTATGAAT ATTGAGGACG TGACCGCAAA ACCCATTAAA
CAATTGGCGC CACTGCTCAC AGATATTCCT GCGGCACGCA TGTATGAAGA AGTGCTTAAA
CTTTTCTTTG CTGGCAAAGC CTTAGCTAAC TTCGAAATGA TGCAAGAATA CAAGTTATTC
GCCCCCTTAT TTCCTCAGGT CGATGCCCTA TTAAAAGAAG ATCCAAAGGG TCCTGCGATG
AAAATGGTGC AGGCCATTAT GAAAAGCACT GACTTACGGG TAAATGAGGA TAAACCTGTT
ACTCCCTCAT TCTTTTATGC GGCCATGCTT TGGTATCCAC TGCGTCAACG TGCTGAGGAT
ATTGCCGTTG AAAGTGGCTT AACTTTATAT GATGCCTTTT TCGCAGCAAT GGGCGATGTG
ATGGAGCAGC AATGCCAAAC CATTAGCATT CCACGTCGCT TTAGCACACC CTCAAAAGAT
ATTTGGCAAT TACAGCTACG CTTTGACCGC AGCCAAGGCA CTCGTGCTTT TAAACTGATG
GAGCACCCTA AGTTTAGAGC CGCCTACGAT CTACTCTTGC TCAGAGGTGA AGTCGAGGGG
GGGAATGTTG CCAAAAGTGC TGCTTGGTGG CAGCAGTTCG TTGAAGCCGA TGAAACCGAG
CGCTTGACTA TCGCTCGTAG TGGTAATAAG TCATCGGGGA ATCGCAATGC TCCTCAGCGT
CGCCGCCGCA GATCAAGTAC GACTAAAGCC AAAGCAGCCG AATAA
|
|---|
| Protein sequence | MIAARFFNHI TDHISRCPIF RRISQFCKQL FEDAPKTTAP TPAQIQSQAS EASSNALSLE
LVPRDAHSIS RKQISENALK VLYRLNKSGF KAYLVGGGVR DLLLGLEPKD FDVVTNATPE
EIKKLFRNCR VVGRRFRLAH IVFGRDVIEV ATFRGHHGES NEKISKANAE GRLLRDNVYG
EIDEDAERRD FTVNALYYDI SDYSIRSYGG GMADLKAGTL RLIGDPETRY REDPVRMLRA
VRFATKLSMN IEDVTAKPIK QLAPLLTDIP AARMYEEVLK LFFAGKALAN FEMMQEYKLF
APLFPQVDAL LKEDPKGPAM KMVQAIMKST DLRVNEDKPV TPSFFYAAML WYPLRQRAED
IAVESGLTLY DAFFAAMGDV MEQQCQTISI PRRFSTPSKD IWQLQLRFDR SQGTRAFKLM
EHPKFRAAYD LLLLRGEVEG GNVAKSAAWW QQFVEADETE RLTIARSGNK SSGNRNAPQR
RRRRSSTTKA KAAE
|
|---|
| |