| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3127 |
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| Symbol | |
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| ID | 5078471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3634089 |
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| End bp | 3634793 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500324 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_001184638 |
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| Protein GI | 146294214 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000109338 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTCG AACCCGCCTT GCAGCAGGGC AGATTAGTTA AACGCTATAA GCGCTTTCTT
GCTGATATAA AGCTCGCCGA TGGCAGTGAG ATGACAATCC ATTGCCCTAA TACAGGTTCA
ATGCGTAACT GTCTCTTCCC CGGAGAAGCC GTGTGGTTTT CAACCTCAGC TAACCCTAAA
CGTAAATATG CATACACGTG GGAGTTAATG GGCACACCCA ATGGTGGTTT TATTGGCATA
CATTCAGGTA GTGCAAATGC CCTAGCCGAA GAAGCCATAC ATAGCGGCAT TATCAAAGAA
CTGACGGGTT ACGACACTTT AAGCCGTGAG GTGAAGTACG GCGATGAAAA CAGCCGTATT
GATATTCTGC TTCAAGGTGC TCAAAAACCA GACTGTTACA TAGAAGTCAA AAGTTGTACT
TTACTCGAAG ATGGACAAGG ATTTTTCCCC GATGCAGTGA GTTTACGCGG CCAAAAACAT
TTGCGTGAAT TGATGCATAT GGCAAATCTT GGCCACCGCG CAGTGCTGTT ATTTGTAGTA
CAGCACTCAG AAATATTCAG CGTTGCGCCT GCAGCACACA TTGATCATGA ATACGCTAAC
CTACTGAAAA AGGCGACTTT ATCGGGTGTT GAAGTATTGG CATATCGCTG CGAAATGTCA
CCAACAGAGA TACGCCTAGC CCAAGCCTGT CCAGTCCGAG TATGA
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| Protein sequence | MQFEPALQQG RLVKRYKRFL ADIKLADGSE MTIHCPNTGS MRNCLFPGEA VWFSTSANPK
RKYAYTWELM GTPNGGFIGI HSGSANALAE EAIHSGIIKE LTGYDTLSRE VKYGDENSRI
DILLQGAQKP DCYIEVKSCT LLEDGQGFFP DAVSLRGQKH LRELMHMANL GHRAVLLFVV
QHSEIFSVAP AAHIDHEYAN LLKKATLSGV EVLAYRCEMS PTEIRLAQAC PVRV
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