| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3110 |
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| Symbol | |
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| ID | 5079750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3617304 |
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| End bp | 3618680 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640500308 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_001184622 |
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| Protein GI | 146294198 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTT CGACTCTTAA GCTAAAACCC GAACTGCTTG AGAACCTTTC TTCTATGGGC
TACAACGAGA TGACGCCAAT TCAGGCGCAA AGTTTGCCAC CCATTTTAGC GGGGCAGGAT
GTGATAGGTC AGGGTAAAAC TGGCTCGGGT AAAACGGCCG CCTTCGGCTT AGGGTTACTG
AACAAGTTAG ACGTTAAACG CTTTCGCATT CAAACCTTAG TGTTATGCCC AACCCGCGAG
TTGGCCGACC AAGTGGCGCA GGAAATCCGC ACCCTTGCCC GTGGTATTCA TAACGTTAAA
GTACTGACAC TTTGCGGCGG TGTACCTATG GGGCCACAGG TTGGCTCGCT GGAACACGGC
GCGCACATTA TTGTGGGTAC GCCGGGTCGT ATCGTCGATC ACTTAGATCG CAATCGCTTA
GATTTAAGCA ATCTCAACAT GTTAGTGCTC GATGAAGCTG ATCGCATGTT AGAAATGGGT
TTCCAACCCG CTCTAGATGC GATTATCGAA CAAGCCCCGC GTGAGCGTCA GACGTTGCTA
TTCAGCGCGA CGTTCCCTGA GCAAATTCAA TCGATTGCTA AGCAAATCAT GTATGACCCA
AGCATGGTTA AAGTCGAAGG TAATCACGAC AGCTTGAGCA TAGCCCAACA TTTCTATCAT
TTAGATGATG ACAAGGCGCG TATGCAAGCG CTGCAATTAT TGTTGTTAGA ACATAAGCCT
GAAAGCGCAG TGGTGTTTTG TAACACTAAA CGCGAAACCC AAAAAGTGGC CGATGAGCTT
GAAGGTTTAG GCTTTAGCGT ATTGGCTTTG CACGGCGATT TAGAGCAAAG AGACAGGGAC
GAAACCCTGC TGCAATTTGC TAATAAGAGT GCCTGTGTAT TAGTGGCGAC CGACGTTGCT
GCCCGTGGTT TAGATATCGA TGCGCTGGAT GCCGTGTTCA ACTATCACGT CGCCTATGAC
ACCGAAGTGC ATATTCACCG TATCGGTCGT ACTGGCCGCG CGGGCAGTAA AGGCGCCGCT
TATACATTCT ATAACGACCA AGACGGTTAC AAAATTGCCT TGTTAGAAGA GTATTTAGAG
CGCGAAATCA CCAGCGAATC ACTACCATCA GAAAGCCTGC TCGGCAACAC GCCTGCAGCG
CCAACCATGA TCACTCTGCA GATCGATGGC GGTAAGAAGG AGAAACTGCG TCCAGGTGAT
ATCTTAGGCG CGCTGACGGG CGAAAACGGT ATCGAAGGCT CTCAGGTGGG TAAAATCCAA
GTGACAGATT ACCGCGCCTA TGTGGCCGTT AATCGTAAGG TTGCCAAGAA AGCGTTGAAC
AAGCTGACTG GCGGGCGCAT TAAAGGTAAA TCTTACCGCG CTTGGCCAAT GAAGTAA
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| Protein sequence | MAFSTLKLKP ELLENLSSMG YNEMTPIQAQ SLPPILAGQD VIGQGKTGSG KTAAFGLGLL
NKLDVKRFRI QTLVLCPTRE LADQVAQEIR TLARGIHNVK VLTLCGGVPM GPQVGSLEHG
AHIIVGTPGR IVDHLDRNRL DLSNLNMLVL DEADRMLEMG FQPALDAIIE QAPRERQTLL
FSATFPEQIQ SIAKQIMYDP SMVKVEGNHD SLSIAQHFYH LDDDKARMQA LQLLLLEHKP
ESAVVFCNTK RETQKVADEL EGLGFSVLAL HGDLEQRDRD ETLLQFANKS ACVLVATDVA
ARGLDIDALD AVFNYHVAYD TEVHIHRIGR TGRAGSKGAA YTFYNDQDGY KIALLEEYLE
REITSESLPS ESLLGNTPAA PTMITLQIDG GKKEKLRPGD ILGALTGENG IEGSQVGKIQ
VTDYRAYVAV NRKVAKKALN KLTGGRIKGK SYRAWPMK
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